I don't know when the problem started happening but I believe it would have been after 5 months ago because that is the last time I did an update for https://github.com/innovoft/Innovoft.IO.SplitReaders https://www.nuget.org/packages/Innovoft.IO.SplitReaders . But at some point the T4 import stopped generating files. I only noticed because I started a new project that I need to follow the same basic setup, and it didn't work. I deleted the *.tt.cs files in Innovoft.IO.SplitReaders and the test project no longer worked, so the problem could be older than 5 months.
Steps to Reproduce:
download https://github.com/innovoft/Innovoft.IO.SplitReaders
build test (only building the library works because otherwise nothing is calling one of the generated methods such as ReadColumnsAdd)
Here is the sections from the csproj file related to T4 that has worked in the past. I don't know how to quote xml.
PropertyGroup
TransformOnBuild: true
OverwriteReadOnlyOutputFiles: true
TransformOutOfDateOnly: false
Import Project="$(VSToolsPath)\TextTemplating\Microsoft.TextTemplating.targets"
Expected Behavior:
T4 create *.tt.cs files that will compiled
Actual Behavior:
As far as I can tell nothing is happening with the T4s.
Check the value of VSToolsPath being used during the build: it's probably not being set.
Try the following instead (assumes you are using VS2022):
<Import Project="$(MSBuildExtensionsPath)\Microsoft\VisualStudio\v17.0\TextTemplating\Microsoft.TextTemplating.targets" />
Related
In package development, each example requires <5s. However, the pair of stan_model() and rstan::sampling() take long times more than 5s as follows:
Examples with CPU or elapsed time > 5s
user system elapsed
fit 1.25 0.11 32.47
So I put \donttest{} for each rstan::sampling() in roxygen comments #'#examples
In examples#'#examples, we should not run sampling() or is there any treatment ?
I had tried to create my package based on the code rstan_package_skeleton(path = 'BayesianAAA') when I was taught from you (Thank you !!) but, I do not understand many things about it.
Previously, rstan_package_skeleton(path = 'BayesianAAA') launched the errors in my computer ( but now the error does not occur).
So, I made my package without the rstan_package_skeleton(), say BayesianAAA, and in my original making, I put the Model_A.stan,Model_B.stan,Model_C.stan,.... in the inst/extdata and I refer my stan files as follows;
scr <- system.file("extdata", "Model_A.stan", package="BayesianAAA")
scr <- rstan::stan_model(scr)
I have many questions about the code rstan_package_skeleton(path = 'BayesianAAA').
1) The first question is How to include my existing stan files and how to refer my .stan files for the rstan::stan_model() ?
According to the page following page, it said that
If we had existing .stan files to include with the package we could use the optional stan_files argument to rstan_package_skeleton to include them.
So, I think I should execute, I am not sure but the following like manner is required;
`rstan_package_skeleton(path = 'BayesianAAA', stan_files = "Model_A.stan" )`.
But I do not know how to write the code for several stan files, say Model_A.stan,Model_B.stan,Model_C.stan in my existing package made without the rstan_package_skeleton(). I do not understand , but the following code is correct ? Since I do not where the files described in the variable stan_files is reflected in the new project created by the rstan_package_skeleton().
`rstan_package_skeleton(path = 'BayesianAAA', stan_files = c("Model_A.stan",`Model_B.stan`,`Model_C.stan` )`.
Here, the another question arise, that is,
2) The second question: Where I execute the code rstan_package_skeleton(path = 'BayesianAAA', stan_files = "Model_A.stan" ) ? I execute it form the R studio console in my existing package project. Is it correct ? And then, the new project arise and it is contained the old existing project. What should I do ?
https://cran.r-project.org/web/packages/rstantools/vignettes/minimal-rstan-package.html
3) I do not quite know about the packages "rstanarm" , but I try to imitate it for my package, but I can not fined any .stan file in it, I am wrong ?
I am sorry for my poor English, and Lack of study about these things.
I would be grateful if you could tell me.
You generally should not be writing a package that calls stan_model at runtime, unless like brms or tmbstan you are generating a Stan program at runtime as opposed to writing it statically. There are dozens of packages on CRAN that provide compiled Stan programs basically by following the build process developed for rstanarm, which is facilitated by the rstantools::rstan_package.skeleton function, the step-by-step guide, and the developer guidelines which directly address your question
CRAN policy permits long installation times but imposes restrictions on the time consumed by examples and unit tests that are much shorter than the time that it takes to compile even a simple Stan program. Thus, it is only possible to adequately test your package if it has pre-compiled Stan programs.
Even then, it can be difficult to sample from a posterior distribution (adequately) in five seconds, so you often have to use small datasets, one chain, a small number of iterations, etc.
It is best to pass the names of your Stan programs (which should end in a .stan extension, not use a period otherwise, and only have ASCII letters, numbers, and the underscore in their names) to rstantools::rstan_package_skeleton(). If doing so from RStudio, I would call it while not in an existing project. Then
During installation, all Stan programs will be compiled and saved in the list stanmodels that can then be used by R function in the package. The rule is that the Stan program compiled from the model code in src/stan_files/foo.stan is stored as list element stanmodels$foo.
There are dozens of R packages that have Stan programs in their src/stan_files directory (although the locations of the Stan programs are going to move to inst/stan for the next rstantools release) that for the most part just followed the vignettes and did not have to do any additional steps except write more R functions.
I have a VB.NET script that looks up the current version of java installed.
Everything worked great until java 8 came out.
Back in Java 7 i would do this.
My.Computer.Registry.GetValue("HKEY_LOCAL_MACHINE\SOFTWARE\JavaSoft\Java Runtime Environment", "Java7FamilyVersion", Nothing)
In Java 8 (Java8FamilyVersion) is gone and has replaced with (FullVersion).
The problem is FullVersion is behind two more folders one with the version (18.0_25) Then another folder call MSI
So here is the problem; right now the first folder is called 18.0_25, but in the future it would be changed to something like 18.0.55ish.
I can't update my software that often, so i would like to use a wilcard in the getvalue
IE something like this
My.Computer.Registry.GetValue("HKEY_LOCAL_MACHINE\SOFTWARE\Wow6432Node\JavaSoft\Java Runtime Environment\1.8.*\MSI", "FullVersion", Nothing)
Above didn't work is their anything that would work?
Use the GetSubKeyNamesmethod to enumerate the subkey(s) of "HKEY_LOCAL_MACHINE\SOFTWARE\Wow6432Node\JavaSoft\Java Runtime Environment", then pick the alphabetically last (so that you do not fall for any old 1.7_xx keys or the 1.8 key)
You could grab a file version from one of the Java .dll files. Sorry, I don't have Java installed, but something like this might help you:
Dim fvi As FileVersionInfo = FileVersionInfo.GetVersionInfo("somefilename.dll")
Debug.Print(fvi.ProductVersion)
You can fiddle with the returned properties for major, minor, etc. You should be able to build a version string to get what you need.
I'm running a cloudera cluster in 3 virtual maschines and try to execute hbase bulk load via a map reduce job. But I got always the error:
error: Class org.apache.hadoop.hbase.mapreduce.HFileOutputFormat not found
So, it seems that the map process doesnt find the class. So I tried this:
1) add the hbase.jar to the HADOOP_CLASSPATH on every node
2) adding TableMapReduceUtil.addDependencyJars(job) / TableMapReduceUtil.addDependencyJars(myConf, HFileOutputFormat.class) to my source code
nothing worked. I have absolute no idea why the class is not found, because the jar/class is definitely available in the classpath.
If I take a look into the job.xml I see the following entry:
name=tmpjars value=file:/C:/Users/Thomas/.m2/repository/org/apache/zookeeper/zookeeper/3.4.5-cdh4.3.0/zookeeper-3.4.5-cdh4.3.0.jar,file:/C:/Users/Thomas/.m2/repository/org/apache/hbase/hbase/0.94.6-cdh4.3.0/hbase-0.94.6-cdh4.3.0.jar,file:/C:/Users/Thomas/.m2/repository/org/apache/hadoop/hadoop-core/2.0.0-mr1-cdh4.3.0/hadoop-core-2.0.0-mr1-cdh4.3.0.jar,file:/C:/Users/Thomas/.m2/repository/com/google/guava/guava/11.0.2/guava-11.0.2.jar,file:/C:/Users/Thomas/.m2/repository/com/google/protobuf/protobuf-java/2.4.0a/protobuf-java-2.4.0a.jar
This seems a little bit odd to me, these are my local jars on the windows system. Maybe this should be the hdfs jars? If yes, how can I change the values for "tmpjars"?
Here is the java code I try to execute:
configuration = new Configuration(false);
configuration.set("mapred.job.tracker", "192.168.2.41:8021");
configuration.set("fs.defaultFS", "hdfs://192.168.2.41:8020/");
configuration.set("hbase.zookeeper.quorum", "192.168.2.41");
configuration.set("hbase.zookeeper.property.clientPort", "2181");
Job job = new Job(configuration, "HBase Bulk Import for "
+ tablename);
job.setJarByClass(HBaseKVMapper.class);
job.setMapperClass(HBaseKVMapper.class);
job.setMapOutputKeyClass(ImmutableBytesWritable.class);
job.setMapOutputValueClass(KeyValue.class);
job.setOutputFormatClass(HFileOutputFormat.class);
job.setPartitionerClass(TotalOrderPartitioner.class);
job.setInputFormatClass(TextInputFormat.class);
HFileOutputFormat.configureIncrementalLoad(job, hTable);
FileInputFormat.addInputPath(job, new Path("myfile1"));
FileOutputFormat.setOutputPath(job, new Path("myfile2"));
job.waitForCompletion(true);
LoadIncrementalHFiles loader = new LoadIncrementalHFiles(
configuration);
loader.doBulkLoad(new Path("myFile3"), hTable);
EDIT:
I tried a little bit more and its totaly strange. I add the following line to the java code:
job.setJarByClass(HFileOutputFormat.class);
after I executed this, the error is gone, but another class not found exception appear:
java.lang.RuntimeException: java.lang.ClassNotFoundException: Class mypackage.bulkLoad.HBaseKVMapper not found
HBaseKVMapper is my custom Mapper Class I want to execute. So, I tried to add it with "job.setJarByClass(HBaseKVMapper.class)", but it doesnt work since its its only a class file and no jar. So I generated a Jarfile including HBaseKVMapper.class. After that, I executed it again and now got the HFileOutputFormat.class not found exception again.
After debugging a little bit, I found out that the setJarByClass Methode only copies the local jar file to .staging/job_#number/job.jar on HDFS. So, this setJarByClass() Method will only work for one jar file because it overwrites the job.jar after executing setJarByClass() again with another jar.
While searching for the eroor I saw the following strcuture in the the job staging direcotry:
and inside the libjars direcotry I saw the relevant jar files
so, the hbase jar is inside the libjars directory but the jobtracker doesn't use this it for executing the job. Why?
I would try using Cloudera Manager (free version) as it takes care of these issues for you. Otherwise note the following:
Both your own classes and the HBase Class HFileOutputFormat need to be available on the classpath locally and remotely.
Submitting the job
Meaning getting the classpath right locally for when your driver runs:
$ env HADOOP_CLASSPATH=$(hbase classpath) hadoop jar path/to/jar class....
On the server
In your hadoop-env.sh
export HADOOP_CLASSPATH=$(hbase claspath)
or use
TableMapReduceUtil.addDependencyJars
I found a "hacked" solution which worked for me, but I'm not happy with it because it's not really practicable.
My "hacked" solution:
create one big Jar with all necessary class files, I called it "big.jar" and add it to the local (eclipse) classpath
add the line: job.setJarByClass(MyMapperClass.class) ... the MyMapperClass has to be in the big.jar
When I execute this the big.jar will be copied for every job to the filesystem. No errors anymore. The problem is, that the jar is 80mb in size and have to be copied every time.
If anywone knows a better way I would be tahnkful if he could tell me how.
EDIT:
Now I try to execute jobs with Apache Pig and have exactly the same problem. My hacked soultion doesn't work in this case because pig creats the jobs automaticly. Here is the pig error:
java.lang.ClassNotFoundException: Class org.apache.hadoop.hbase.mapreduce.TableSplit not found
I was trying to add upshot to my mvc 4 project.
My problem is that i am needed to add System.Json and System.Web.Http.Common to get
#(Html.UpshotContext(bufferChanges: true).DataSource<S_Innovations.TrafficTheory.Web2.APIControllers.TheoryTestsController>(x => x.GetTheoryTests()))
working.
After adding Json i get Could not load file or assembly 'System.Web.Http.Common, and when i add this i cant compile.
Error 15 The type 'System.Web.Http.RouteParameter' exists in both 'g:\Documents\Visual Studio 2012\Projects\S-Innovations.TrafficTheory\packages\System.Web.Http.Common.4.0.20126.16343\lib\net40\System.Web.Http.Common.dll' and 'g:\Documents\Visual Studio 2012\Projects\S-Innovations.TrafficTheory\packages\Microsoft.AspNet.WebApi.Core.4.0.20710.0\lib\net40\System.Web.Http.dll' G:\Documents\Visual Studio 2012\Projects\S-Innovations.TrafficTheory\S-Innovations.TrafficTheory.Web2\App_Start\WebApiConfig.cs 19
The problem is that you have 2 different references to the System.Web.Http.dll. Once from the System.Web.Http.Common package and the other from the Microsoft.AspNet.WebApi.Core pakage.
I think you will have to remove one of the packages and it will work. An other thing you can do is look in the reference folder and search for the duplicate reference.
I am trying to run tests by adding a version of tornado downloaded from github.com in the sys.path.
[tests]
recipe = zc.recipe.testrunner
extra-paths = ${buildout:directory}/parts/tornado/
defaults = ['--auto-color', '--auto-progress', '-v']
But when I run bin/tests I get the following error :
ImportError: No module named tornado
Am I not understanding how to use extra-paths ?
Martin
Have you tried looking into generated bin/tests script if it contains your path? It will tell definitely if your buildout.cfg is correct or not. Maybe problem is elsewhere. Because it seem that your code is ok.
If you happen to regularly include various branches from git/mercurial or elsewhere to buildout, you might be interested in mr.developer. mr.developer can download and add package to develop =. You wont need to set extra-path in every section.