DataFrame append to DataFrame row by row and reset if condition is matched - pandas

I have a DataFrame which I want to slice into many DataFrames by adding rows by one until the sum of column Score of the DataFrame is greater than 50,000. Once that condition is met, then I want a new slice to begin.
Here is an example of what this might look like:

Sum Score cumulatively, floor divide it by 50,000, and shift it up one cell (since you want each group to be > 50,000 and not < 50,000).
import pandas as pd
import numpy as np
# Generating DataFrame with random data
df = pd.DataFrame(np.random.randint(1,60000,15))
# Creating new column that's a cumulative sum with each
# value floor divided by 50000
df['groups'] = df[0].cumsum() // 50000
# Values shifted up one and missing values filled with the maximum value
# so that values at the bottom are included in the last DataFrame slice
df.groups = df.groups.shift(-1, fill_value=df.groups.max())
Then as per this answer you can use pandas.DataFrame.groupby in a list comprehension to return a list of split DataFrames.
df_list = [df_slice for _, df_slice in df.groupby(['groups'])]

Related

How to apply function to each column and row of dataframe pandas

I have two dataframes.
df1 has an index list made of strings like (row1,row2,..,rown) and a column list made of strings like (col1,col2,..,colm) while df2 has k rows and 3 columns (char_1,char_2,value). char_1 contains strings like df1 indexes while char_2 contains strings like df1 columns. I only want to assign the df2 value to df1 in the right position. For example if the first row of df2 reads ['row3','col1','value2'] I want to assign value2 to df1 in the position ([2,0]) (third row and first column).
I tried to use two functions to slide rows and columns of df1:
def func1(val):
# first I convert the series to dataframe
val=val.to_frame()
val=val.reset_index()
val=val.set_index('index') # I set the index so that it's the right column
def func2(val2):
try: # maybe the combination doesn't exist
idx1=list(cou.index[df2[char_2]==(val2.name)]) #val2.name reads col name of df1
idx2=list(cou.index[df2[char_1]==val2.index.values[0]]) #val2.index.values[0] reads index name of df1
idx= list(reduce(set.intersection, map(set, [idx1,idx2])))
idx=int(idx[0]) # final index of df2 where I need to take value to assign to df1
check=1
except:
check=0
if check==1: # if index exists
val2[0]=df2['value'][idx] # assign value to df1
return val2
val=val.apply(func2,axis=1) #apply the function for columns
val=val.squeeze() #convert again to series
return val
df1=df1.apply(func1,axis=1) #apply the function for rows
I made the conversion inside func1 because without this step I wasn't able to work with series keeping index and column names so I wasn't able to find the index idx in func2.
Well the problem is that it takes forever. df1 size is (3'600 X 20'000) and df2 is ( 500 X 3 ) so it's not too much. I really don't understand the problem.. I run the code for the first row and column to check the result and it's fine and it takes 1 second, but now for the entire process I've been waiting for hours and it's still not finished.
Is there a way to optimize it? As I wrote in the title I only need to run a function that keeps column and index names and works sliding the entire dataframe. Thanks in advance!

Interpolate values based in date in pandas

I have the following datasets
import pandas as pd
import numpy as np
df = pd.read_excel("https://github.com/norhther/datasets/raw/main/ncp1b.xlsx",
sheet_name="Sheet1")
df2 = pd.read_excel("https://github.com/norhther/datasets/raw/main/ncp1b.xlsx",
sheet_name="Sheet2")
df2.dropna(inplace = True)
For each group of values on the first df X-Axis Value, Y-Axis Value, where the first one is the date and the second one is a value, I would like to create rows with the same date. For instance, df.iloc[0,0] the timestamp is Timestamp('2020-08-25 23:14:12'). However, in the following columns of the same row maybe there is other dates with different Y-Axis Value associated. The first one in that specific row being X-Axis Value NCVE-064 HPNDE with a timestap 2020-08-25 23:04:12 and a Y-Axis Value associated of value 0.952.
What I want to accomplish is to interpolate those values for a time interval, maybe 10 minutes, and then merge those results to have the same date for each row.
For the df2 is moreless the same, interpolate the values in a time interval and add them to the original dataframe. Is there any way to do this?
The trick is to realize that datetimes can be represented as seconds elapsed with respect to some time.
Without further context part the hardest things is to decide at what times you wants to have the interpolated values.
import pandas as pd
import numpy as np
from scipy.interpolate import interp1d
df = pd.read_excel(
"https://github.com/norhther/datasets/raw/main/ncp1b.xlsx",
sheet_name="Sheet1",
)
x_columns = [col for col in df.columns if col.startswith("X-Axis")]
# What time do we want to align the columsn to?
# You can use anything else here or define equally spaced time points
# or something else.
target_times = df[x_columns].min(axis=1)
def interpolate_column(target_times, x_times, y_values):
ref_time = x_times.min()
# For interpolation we need to represent the values as floats. One options is to
# compute the delta in seconds between a reference time and the "current" time.
deltas = (x_times - ref_time).dt.total_seconds()
# repeat for our target times
target_times_seconds = (target_times - ref_time).dt.total_seconds()
return interp1d(deltas, y_values, bounds_error=False,fill_value="extrapolate" )(target_times_seconds)
output_df = pd.DataFrame()
output_df["Times"] = target_times
output_df["Y-Axis Value NCVE-063 VPNDE"] = interpolate_column(
target_times,
df["X-Axis Value NCVE-063 VPNDE"],
df["Y-Axis Value NCVE-063 VPNDE"],
)
# repeat for the other columns, better in a loop

Change the stacked bar chart to Stacked Percentage Bar Plot

How can I change this stacked bar into a stacked Percentage Bar Plot with percentage labels:
here is the code:
df_responses= pd.read_csv('https://raw.githubusercontent.com/eng-aomar/Security_in_practice/main/secuirtyInPractice.csv')
df_new =df_responses.iloc[:,9:21]
image_format = 'svg' # e.g .png, .svg, etc.
# initialize empty dataframe
df2 = pd.DataFrame()
# group by each column counting the size of each category values
for col in df_new:
grped = df_new.groupby(col).size()
grped = grped.rename(grped.index.name)
df2 = df2.merge(grped.to_frame(), how='outer', left_index=True, right_index=True)
# plot the merged dataframe
df2.plot.bar(stacked=True)
plt.show()
You can just calculate the percentages yourself e.g. in a new column of your dataframe as you do have the absolute values and plot this column instead.
Using sum() and division using dataframes you should get there quickly.
You might wanna have a look at GeeksForGeeks post which shows how this could be done.
EDIT
I have now gone ahead and adjusted your program so it will give the results that you want (at least the result I think you would like).
Two key functions that I used and you did not, are df.value_counts() and df.transpose(). You might wanna read on those two as they are quite helpful in many situations.
import pandas as pd
import matplotlib.pyplot as plt
df_responses= pd.read_csv('https://raw.githubusercontent.com/eng-aomar/Security_in_practice/main/secuirtyInPractice.csv')
df_new =df_responses.iloc[:,9:21]
image_format = 'svg' # e.g .png, .svg, etc.
# initialize empty dataframe providing the columns
df2 = pd.DataFrame(columns=df_new.columns)
# loop over all columns
for col in df_new.columns:
# counting occurences for each value can be done by value_counts()
val_counts = df_new[col].value_counts()
# replace nan values with 0
val_counts.fillna(0)
# calculate the sum of all categories
total = val_counts.sum()
# use value count for each category and divide it by the total count of all categories
# and multiply by 100 to get nice percent values
df2[col] = val_counts / total * 100
# columns and rows need to be transposed in order to get the result we want
df2.transpose().plot.bar(stacked=True)
plt.show()

Pandas groupby year filtering the dataframe by n largest values

I have a dataframe at hourly level with several columns. I want to extract the entire rows (containing all columns) of the 10 top values of a specific column for every year in my dataframe.
so far I ran the following code:
df = df.groupby([df.index.year])['totaldemand'].apply(lambda grp: grp.nlargest(10)))
The problem here is that I only get the top 10 values for each year of that specific column and I lose the other columns. How can I do this operation and having the corresponding values of the other columns that correspond to the top 10 values per year of my 'totaldemand' column?
We usually do head after sort_values
df = df.sort_values('totaldemand',ascending = False).groupby([df.index.year])['totaldemand'].head(10)
nlargest can be applied to each group, passing the column to look for
largest values.
So run:
df.groupby([df.index.year]).apply(lambda grp: grp.nlargest(3, 'totaldemand'))
Of course, in the final version replace 3 with your actual value.
Get the index of your query and use it as a mask on your original df:
idx = df.groupby([df.index.year])['totaldemand'].apply(lambda grp: grp.nlargest(10))).index.to_list()
df.iloc[idx,]
(or something to that extend, I can't test now without any test data)

pandas / numpy arithmetic mean in csv file

I have a csv file which contains 3000 rows and 5 columns, which constantly have more rows appended to it on a weekly basis.
What i'm trying to do is to find the arithmetic mean for the last column for the last 1000 rows, every week. (So when new rows are added to it weekly, it'll just take the average of most recent 1000 rows)
How should I construct the pandas or numpy array to achieve this?
df = pd.read_csv(fds.csv, index_col=False, header=0)
df_1 = df['Results']
#How should I write the next line of codes to get the average for the most 1000 rows?
I'm on a different machine than what my pandas is installed on so I'm going on memory, but I think what you'll want to do is...
df = pd.read_csv(fds.csv, index_col=False, header=0)
df_1 = df['Results']
#Let's pretend your 5th column has a name (header) of `Stuff`
last_thousand = df_1.tail(1000)
np.mean(last_thousand.Stuff)
A little bit quicker using mean():
df = pd.read_csv("fds.csv", header = 0)
results = df.tail(1000).mean()
Results will contain the mean for each column within the last 1000 rows. If you want more statistics, you can also use describe():
resutls = df.tail(1000).describe().unstack()
So basically I needed to use the pandas tail function. My Code below works.
df = pd.read_csv(fds.csv, index_col=False, header=0)
df_1 = df['Results']
numpy.average(df_1.tail(1000))