I'm trying to run python code that uses the pandas library on the BeagleBone Black. I have all the necessary libraries and packages downloaded onto the device. When I try to run the code, I get an error regarding the numpy.ndarray size being changed. Currently, I am using Python 3.7.3, numpy 1.20.1, and pandas 1.3.5.
When I try to my python file, an error occurs with importing the pandas library. The traceback of the error I'm encountering is included below. I have tried the following to resolve this issue:
pip install --upgrade numpy
and
pip uninstall numpy
pip install numpy
as suggested here.
Traceback
root#beaglebone:/mnt/microSD# python chunkANDconvert.py
Traceback (most recent call last):
File "chunkANDconvert.py", line 2, in <module>
import pandas as pd
File "/usr/local/lib/python3.7/dist-packages/pandas/__init__.py", line 22, in <module>
from pandas.compat import (
File "/usr/local/lib/python3.7/dist-packages/pandas/compat/__init__.py", line 15, in <module>
from pandas.compat.numpy import (
File "/usr/local/lib/python3.7/dist-packages/pandas/compat/numpy/__init__.py", line 7, in <module>
from pandas.util.version import Version
File "/usr/local/lib/python3.7/dist-packages/pandas/util/__init__.py", line 1, in <module>
from pandas.util._decorators import ( # noqa
File "/usr/local/lib/python3.7/dist-packages/pandas/util/_decorators.py", line 14, in <module>
from pandas._libs.properties import cache_readonly # noqa
File "/usr/local/lib/python3.7/dist-packages/pandas/_libs/__init__.py", line 13, in <module>
from pandas._libs.interval import Interval
File "pandas/_libs/interval.pyx", line 1, in init pandas._libs.interval
ValueError: numpy.ndarray size changed, may indicate binary incompatibility. Expected 44 from C header, got 40 from PyObject
Related
I have installed matplotlib via pip3 in venv. After importing I get the error as below. Have changed the directory long path to ...PATH.
>>> import matplotlib
Traceback (most recent call last):
File "<stdin>", line 1, in <module>
File "...PATH/lib/python3.11/site-packages/matplotlib/__init__.py", line 113, in <module>
from . import _api, _version, cbook, _docstring, rcsetup
File "...PATH/lib/python3.11/site-packages/matplotlib/rcsetup.py", line 27, in <module>
from matplotlib.colors import Colormap, is_color_like
File "...PATH/lib/python3.11/site-packages/matplotlib/colors.py", line 51, in <module>
from PIL import Image
File "...PATH/lib/python3.11/site-packages/PIL/Image.py", line 103, in <module>
from . import _imaging as core
ImportError: libwebp.so.6: cannot open shared object file: No such file or directory
After looking at pillow website I learnt that
Pillow >= 2.1.0 no longer supports import _imaging. Please use from
PIL.Image import core as _imaging instead.
I am using pillow 9.4.0. And the last line of matplotlib error says that it is importing _imaging, which is no more valid in pillow. Matplotlib version is 3.6.3.
For the missing shared library (libwebp), being complained in the error, I have verified that it is already installed via dev package.
I tried running simple plotting code in Visual Studio Code, but it doesn't seem to work.
import matplotlib.pyplot as plt
x = [1,2,3]
y = [4,5,6]
plt.plot(x,y)
plt.show()
This keeps coming up:
Traceback (most recent call last):
File "c:\Users\sony\PycharmProjects\ip project\plot.py", line 1, in <module>
import matplotlib.pyplot as plt
File "C:\Users\sony\AppData\Roaming\Python\Python39\site-packages\matplotlib\__init__.py", line 107, in <module>
from . import _api, cbook, docstring, rcsetup
File "C:\Users\sony\AppData\Roaming\Python\Python39\site-packages\matplotlib\rcsetup.py", line 27, in <module>
from matplotlib.fontconfig_pattern import parse_fontconfig_pattern
File "C:\Users\sony\AppData\Roaming\Python\Python39\site-packages\matplotlib\fontconfig_pattern.py", line 15, in <module>
from pyparsing import (Literal, ZeroOrMore, Optional, Regex, StringEnd,
ModuleNotFoundError: No module named 'pyparsing'
I tried installing pyparsing and this came up:
PS C:\Users\sony\OneDrive\Desktop\VSC Python Projects> pip install pyparsing
Defaulting to user installation because normal site-packages is not writeable
Requirement already satisfied: pyparsing in c:\program files\python39\lib\site-packages (2.4.7)
WARNING: Error parsing requirements for iniconfig: [Errno 2] No such file or directory: 'c:\\program files\\python39\\lib\\site-packages\\iniconfig-1.1.1.dist-info\\METADATA'
Why does this happen?
While trying to import gensim, I run into the following error
Traceback (most recent call last):
File "c:\Users\usr\Documents\hello\test.py", line 3, in <module>
import gensim
File "C:\Users\usr\AppData\Local\Packages\PythonSoftwareFoundation.Python.3.7_qbz5n2kfra8p0\LocalCache\local-packages\Python37\site-packages\gensim\__init__.py", line 5, in <module>
from gensim import parsing, corpora, matutils, interfaces, models, similarities, summarization, utils # noqa:F401
File "C:\Users\usr\AppData\Local\Packages\PythonSoftwareFoundation.Python.3.7_qbz5n2kfra8p0\LocalCache\local-packages\Python37\site-packages\gensim\corpora\__init__.py", line 6, in <module>
from .indexedcorpus import IndexedCorpus # noqa:F401 must appear before the other classes
File "C:\Users\usr\AppData\Local\Packages\PythonSoftwareFoundation.Python.3.7_qbz5n2kfra8p0\LocalCache\local-packages\Python37\site-packages\gensim\corpora\indexedcorpus.py", line 15, in <module>
from gensim import interfaces, utils
File "C:\Users\usr\AppData\Local\Packages\PythonSoftwareFoundation.Python.3.7_qbz5n2kfra8p0\LocalCache\local-packages\Python37\site-packages\gensim\interfaces.py", line 21, in <module>
from gensim import utils, matutils
File "C:\Users\usr\AppData\Local\Packages\PythonSoftwareFoundation.Python.3.7_qbz5n2kfra8p0\LocalCache\local-packages\Python37\site-packages\gensim\matutils.py", line 21, in <module>
from scipy.stats import entropy
File "C:\Users\usr\AppData\Local\Packages\PythonSoftwareFoundation.Python.3.7_qbz5n2kfra8p0\LocalCache\local-packages\Python37\site-packages\scipy\stats\__init__.py", line 384, in <module>
from .stats import *
File "C:\Users\usr\AppData\Local\Packages\PythonSoftwareFoundation.Python.3.7_qbz5n2kfra8p0\LocalCache\local-packages\Python37\site-packages\scipy\stats\stats.py", line 179, in <module>
from scipy.spatial.distance import cdist
File "C:\Users\usr\AppData\Local\Packages\PythonSoftwareFoundation.Python.3.7_qbz5n2kfra8p0\LocalCache\local-packages\Python37\site-packages\scipy\spatial\__init__.py", line 99, in <module>
from .qhull import *
ImportError: DLL load failed: The specified module could not be found.
I have tried uninstalling numpy, scipy and gensim using pip in the command prompt and installing them again, but this does not resolve the issue.
I have also looked at the suggestions to a similar problem here, and tried installing numpy‑1.19.0+mkl‑cp37‑cp37m‑win_amd64.whl, but it resulted in a separate error Importing the numpy c-extensions failed. Thus, I have stuck to using numpy, scipy and gensim installed via pip.
Additionally, I installed scipy version 1.4.1 as the latest 1.5.0 version will give the following error as described in this link:
Error when loading scipy: OSError: [WinError 126] The specified module could not be found
Any help is greatly appreciated!
For additional information, I am using Python 3.7 and Windows 10.
I had the same problem and tried various things, but the only thing that worked for me was to install an older version of Gensim.
pip install gensim==3.7.0
Thank you in advance. I have pandas-datareader==0.7.0+7.g7949e60 succesfull installed, but when i run the scripts, appears this:
Traceback (most recent call last):
File "/home/pepew/sss/screener/cargadordatos.py", line 14, in <module>
from pandas_datareader import data as pdr
File "/home/pepew/.virtualenvs/myproject/lib/python3.5/site-packages/pandas_datareader/__init__.py", line 2, in <module>
from .data import (DataReader, Options, get_components_yahoo,
File "/home/pepew/.virtualenvs/myproject/lib/python3.5/site-packages/pandas_datareader/data.py", line 7, in <module>
from pandas_datareader.av.forex import AVForexReader
File "/home/pepew/.virtualenvs/myproject/lib/python3.5/site-packages/pandas_datareader/av/__init__.py", line 3, in <module>
from pandas_datareader.base import _BaseReader
File "/home/pepew/.virtualenvs/myproject/lib/python3.5/site-packages/pandas_datareader/base.py", line 13, in <module>
from pandas_datareader._utils import (RemoteDataError, SymbolWarning,
File "/home/pepew/.virtualenvs/myproject/lib/python3.5/site-packages/pandas_datareader/_utils.py", line 5, in <module>
from pandas_datareader.compat import is_number
File "/home/pepew/.virtualenvs/myproject/lib/python3.5/site-packages/pandas_datareader/compat/__init__.py", line 24, in <module>
from pandas.testing import assert_frame_equal
ImportError: No module named 'pandas.testing'
>>>
Pandas-datareader appears to require pandas version 0.19.2+. But the pandas.testing module was only added in 0.20.1
A workaround would be to upgrade the pandas package: pip install pandas -U
Pandas Datareader requires pandas version 0.19.2 or higher. This error is likely due to the fact that your pandas version is before 0.19.2. If this is the case, the best way to update pandas is:
pip install pandas -U
I am running Python 3.5.1 on Windows 10 and have Anaconda and IDLE installed.
If I run any Python files, pandas and numpy seem to work in Jupyter notebooks, but not in IDLE.
I have ensured that the PATH and PYTHONPATH environment variables include access to the folders where pandas and numpy are located (Lib/site-packages).
I receive the following error in IDLE when trying to import pandas:
Traceback (most recent call last):
File "<pyshell#1>", line 1, in <module>
import pandas
File "C:\Users\me\AppData\Local\Continuum\Anaconda3\Lib\site-packages\pandas\__init__.py", line 18, in <module>
raise ImportError("Missing required dependencies {0}".format(missing_dependencies))
ImportError: Missing required dependencies ['numpy']
When I try to import numpy I get the following error:
Traceback (most recent call last):
File "<pyshell#2>", line 1, in <module>
import numpy
File "C:\Users\me\AppData\Local\Continuum\Anaconda3\Lib\site-packages\numpy\__init__.py", line 180, in <module>
from . import add_newdocs
File "C:\Users\me\AppData\Local\Continuum\Anaconda3\Lib\site-packages\numpy\add_newdocs.py", line 13, in <module>
from numpy.lib import add_newdoc
File "C:\Users\me\AppData\Local\Continuum\Anaconda3\Lib\site-packages\numpy\lib\__init__.py", line 8, in <module>
from .type_check import *
File "C:\Users\me\AppData\Local\Continuum\Anaconda3\Lib\site-packages\numpy\lib\type_check.py", line 11, in <module>
import numpy.core.numeric as _nx
File "C:\Users\me\AppData\Local\Continuum\Anaconda3\Lib\site-packages\numpy\core\__init__.py", line 14, in <module>
from . import multiarray
ImportError: cannot import name 'multiarray'
Can someone help?
try this:
I had the same problem
https://stackoverflow.com/a/40637960/6376603
maybe the above answer will help.
I had similar problem. I uninstalled anaconda from my system completely.
Steps - Delete app, delete anaconda3 folder, empty trash
Then I reinstalled older version of it and it started working perfectly. Maybe it is some kind of bug in the newer version.