Duplicated rows when merging on pandas - pandas

I have a list that contains multiple pandas dataframes.
Each dataframe has columns 'Trading Day' and Maturity.
However the name of the column Maturity changes depending on the maturity, for example the first dataframe column names are: 'Trading Day', 'Y_2021','Y_2022'.
The second dataframe has 'Trading Day',Y_2022','Y_2023','Y_2024'.
The column 'Trading day' has all unique np.datetime64 dates for every dataframe
And the maturity columns have either floats or nans
My goal is to merge all the dataframes into one and have something like:
'Trading Day','Y_2021,'Y_2022','Y_2023',...'Y_2030'
In my code gh is the list that contains all the dataframes and original is a dataframe that contains all the dates from 5 years ago through today.
gt is the final dataframe.
So far what I have done is:
original = pd.DataFrame()
original['Trading Day'] = np.arange(np.datetime64(str(year_now-5)+('-01-01')), np.datetime64(date.today())+1)
for i in range(len(gh)):
gh[i]['Trading Day']=gh[i]['Trading Day'].astype('datetime64[ns]')
gt = pd.merge(original,gh[0],on='Trading Day',how = 'left')
for i in range (1,len(gh)):
gt=pd.merge(gt,gh[i],how='outer')
The code works more or less the problem is that when there is a change of years I get the following example results:
Y_2021 Y_2023 Y_2024
2020-06-05 45
2020-06-05 54
2020-06-05 43
2020-06-06 34
2020-06-06 23
2020-06-06 34
#While what I want is:
Y_2021 Y_2023 Y_2024
2020-06-05 45 54 43
2020-06-06 34 23 34

Given your actual output and what you want, you should be able to just:
output.ffill().bfill().drop_duplicates()
To get the output you want.

Found the fix:
gt = gt.groupby('Trading Day').sum()
gt = gt.replace(0, np.nan)

Related

Get difference in rank position between different sorted pandas DataFrames

I have separate pandas DataFrame objects containing two columns each. One column is a team name and the other is a numerical value by which I sorted the entries in the DataFrame. Here is an example of two of these dataframes with generic values:
df1:
Name PPG
1 TOR 105.0
11 SAC 102.5
17 LAL 100.0
15 PHX 98.5
df2:
Name TRB
17 LAL 45.0
11 SAC 44.0
15 PHX 42.5
1 TOR 42.0
What I want to do is get the difference in the ranking of each team ('Name') in these separate dataframes. For example, LAL is ranked 3rd in PPG and 1st in TRB. Is there a way I could get the difference in ranking position (in this example with LAL, it would be 2, and for SAC it would be 0, and so on)?
So far, I have used df1['PPG'].rank() and df2['TRB'].rank to create a new rank column in each dataframe. Once I have that, I tried using df1['Rank'].compare(df2['Rank']) but I get the following error:
ValueError: Can only compare identically-labeled Series objects

how split data with respect of months?

Hi I have a time series data set. I would like to make a new column for each month.
data:
creationDate fre skill
2019-02-15T20:43:29Z 14 A
2019-02-15T21:10:32Z 15 B
2019-03-22T07:14:50Z 41 A
2019-03-22T06:47:41Z 64 B
2019-04-11T09:49:46Z 25 A
2019-04-11T09:49:46Z 29 B
output:
skill 2019-02 2019-03 2019-04
A 14 41 25
B 15 64 29
I know I can do it manually like below and make columns (when I have date1_start and date1_end):
dfdate1=data[(data['creationDate'] >= date1_start) & (data['creationDate']<= date1_end)]
But since I have many many months, it is not feasible to that this ways for each month.
Use DataFrame.pivot with convert datetimes to month periods by Series.dt.to_period:
df['dates'] = pd.to_datetime(df['creationDate']).dt.to_period('m')
df = df.pivot('skill','dates','fre')
Or to custom strings YYYY-MM by Series.dt.strftime:
df['dates'] = pd.to_datetime(df['creationDate']).dt.strftime('%Y-%m')
df = df.pivot('skill','dates','fre')
EDIT:
ValueError: Index contains duplicate entries, cannot reshape
It means there are duplicates, use DataFrame.pivot_table with some aggregation, e.g. sum, mean:
df = df.pivot_table(index='skill',columns='dates',values='fre', aggfunc='sum')

how to group by month and another column pandas data frame

I have a data frame that looks like below:
import pandas as pd
df = pd.DataFrame({'Date':[2019-08-06,2019-08-08,2019-08-01,2019-10-12], 'Name':['A','A','B','C'], 'grade':[100,90,69,80]})
I want to groupby the data by month and year from the Datetime and also group by Name. Then sum up the other columns.
So, the desired output will be something similar to this
df = pd.DataFrame({'Date':[2019-08, 2019-08, 2019-10-12], 'Name':['A','B','C'], 'grade':[190,69,80]})
I have tried grouper
df.groupby(pd.Grouper(freq='M').sum()
However, it won't take the Name column into play and just drop the entire column.
Try :
df['Date'] = pd.to_datetime(df.Date)
df.groupby([df.Date.dt.to_period('M'), 'Name']).sum().reset_index()
Date Name grade
0 2019-08 A 190
1 2019-08 B 69
2 2019-10 C 80
I assume date column is of dtype datetime. Then group with
grouped = df.groupby([df.Date.dt.year, df.Date.dt.month, 'Name']).sum()

How could i download a dataframe after performing some calculations on it , with the new result?

Link: https://gist.github.com/dishantrathi/541db1a19a8feaf114723672d998b857
Input was a set of date ranging from 2012 - 2015, and need to count the number of time a date repeated.
After counting, I have a dataset of dates and counted the unique counts of each date and now I have to download the unique count with the corresponding date in Ascending Order.
The output file should be in csv.
I believe you need reset_index for 2 column DataFrame from Series, sort by sort_values:
df1 = df.groupby('Date').size().reset_index(name='count').sort_values('count')
Another solution with value_counts:
df1 = (df['Date'].value_counts()
.rename_axis('Date')
.reset_index(name='count')
.sort_values('count'))
print (df1.head())
Date count
66 02-05-2014 54
594 13-05-2014 56
294 07-02-2014 57
877 19-04-2013 58
162 04-05-2014 59
df1.to_csv('file.csv', index=False)

dataframe slicing with loc [duplicate]

How do I select columns a and b from df, and save them into a new dataframe df1?
index a b c
1 2 3 4
2 3 4 5
Unsuccessful attempt:
df1 = df['a':'b']
df1 = df.ix[:, 'a':'b']
The column names (which are strings) cannot be sliced in the manner you tried.
Here you have a couple of options. If you know from context which variables you want to slice out, you can just return a view of only those columns by passing a list into the __getitem__ syntax (the []'s).
df1 = df[['a', 'b']]
Alternatively, if it matters to index them numerically and not by their name (say your code should automatically do this without knowing the names of the first two columns) then you can do this instead:
df1 = df.iloc[:, 0:2] # Remember that Python does not slice inclusive of the ending index.
Additionally, you should familiarize yourself with the idea of a view into a Pandas object vs. a copy of that object. The first of the above methods will return a new copy in memory of the desired sub-object (the desired slices).
Sometimes, however, there are indexing conventions in Pandas that don't do this and instead give you a new variable that just refers to the same chunk of memory as the sub-object or slice in the original object. This will happen with the second way of indexing, so you can modify it with the .copy() method to get a regular copy. When this happens, changing what you think is the sliced object can sometimes alter the original object. Always good to be on the look out for this.
df1 = df.iloc[0, 0:2].copy() # To avoid the case where changing df1 also changes df
To use iloc, you need to know the column positions (or indices). As the column positions may change, instead of hard-coding indices, you can use iloc along with get_loc function of columns method of dataframe object to obtain column indices.
{df.columns.get_loc(c): c for idx, c in enumerate(df.columns)}
Now you can use this dictionary to access columns through names and using iloc.
As of version 0.11.0, columns can be sliced in the manner you tried using the .loc indexer:
df.loc[:, 'C':'E']
is equivalent to
df[['C', 'D', 'E']] # or df.loc[:, ['C', 'D', 'E']]
and returns columns C through E.
A demo on a randomly generated DataFrame:
import pandas as pd
import numpy as np
np.random.seed(5)
df = pd.DataFrame(np.random.randint(100, size=(100, 6)),
columns=list('ABCDEF'),
index=['R{}'.format(i) for i in range(100)])
df.head()
Out:
A B C D E F
R0 99 78 61 16 73 8
R1 62 27 30 80 7 76
R2 15 53 80 27 44 77
R3 75 65 47 30 84 86
R4 18 9 41 62 1 82
To get the columns from C to E (note that unlike integer slicing, E is included in the columns):
df.loc[:, 'C':'E']
Out:
C D E
R0 61 16 73
R1 30 80 7
R2 80 27 44
R3 47 30 84
R4 41 62 1
R5 5 58 0
...
The same works for selecting rows based on labels. Get the rows R6 to R10 from those columns:
df.loc['R6':'R10', 'C':'E']
Out:
C D E
R6 51 27 31
R7 83 19 18
R8 11 67 65
R9 78 27 29
R10 7 16 94
.loc also accepts a Boolean array so you can select the columns whose corresponding entry in the array is True. For example, df.columns.isin(list('BCD')) returns array([False, True, True, True, False, False], dtype=bool) - True if the column name is in the list ['B', 'C', 'D']; False, otherwise.
df.loc[:, df.columns.isin(list('BCD'))]
Out:
B C D
R0 78 61 16
R1 27 30 80
R2 53 80 27
R3 65 47 30
R4 9 41 62
R5 78 5 58
...
Assuming your column names (df.columns) are ['index','a','b','c'], then the data you want is in the
third and fourth columns. If you don't know their names when your script runs, you can do this
newdf = df[df.columns[2:4]] # Remember, Python is zero-offset! The "third" entry is at slot two.
As EMS points out in his answer, df.ix slices columns a bit more concisely, but the .columns slicing interface might be more natural, because it uses the vanilla one-dimensional Python list indexing/slicing syntax.
Warning: 'index' is a bad name for a DataFrame column. That same label is also used for the real df.index attribute, an Index array. So your column is returned by df['index'] and the real DataFrame index is returned by df.index. An Index is a special kind of Series optimized for lookup of its elements' values. For df.index it's for looking up rows by their label. That df.columns attribute is also a pd.Index array, for looking up columns by their labels.
In the latest version of Pandas there is an easy way to do exactly this. Column names (which are strings) can be sliced in whatever manner you like.
columns = ['b', 'c']
df1 = pd.DataFrame(df, columns=columns)
In [39]: df
Out[39]:
index a b c
0 1 2 3 4
1 2 3 4 5
In [40]: df1 = df[['b', 'c']]
In [41]: df1
Out[41]:
b c
0 3 4
1 4 5
With Pandas,
wit column names
dataframe[['column1','column2']]
to select by iloc and specific columns with index number:
dataframe.iloc[:,[1,2]]
with loc column names can be used like
dataframe.loc[:,['column1','column2']]
You can use the pandas.DataFrame.filter method to either filter or reorder columns like this:
df1 = df.filter(['a', 'b'])
This is also very useful when you are chaining methods.
You could provide a list of columns to be dropped and return back the DataFrame with only the columns needed using the drop() function on a Pandas DataFrame.
Just saying
colsToDrop = ['a']
df.drop(colsToDrop, axis=1)
would return a DataFrame with just the columns b and c.
The drop method is documented here.
I found this method to be very useful:
# iloc[row slicing, column slicing]
surveys_df.iloc [0:3, 1:4]
More details can be found here.
Starting with 0.21.0, using .loc or [] with a list with one or more missing labels is deprecated in favor of .reindex. So, the answer to your question is:
df1 = df.reindex(columns=['b','c'])
In prior versions, using .loc[list-of-labels] would work as long as at least one of the keys was found (otherwise it would raise a KeyError). This behavior is deprecated and now shows a warning message. The recommended alternative is to use .reindex().
Read more at Indexing and Selecting Data.
You can use Pandas.
I create the DataFrame:
import pandas as pd
df = pd.DataFrame([[1, 2,5], [5,4, 5], [7,7, 8], [7,6,9]],
index=['Jane', 'Peter','Alex','Ann'],
columns=['Test_1', 'Test_2', 'Test_3'])
The DataFrame:
Test_1 Test_2 Test_3
Jane 1 2 5
Peter 5 4 5
Alex 7 7 8
Ann 7 6 9
To select one or more columns by name:
df[['Test_1', 'Test_3']]
Test_1 Test_3
Jane 1 5
Peter 5 5
Alex 7 8
Ann 7 9
You can also use:
df.Test_2
And you get column Test_2:
Jane 2
Peter 4
Alex 7
Ann 6
You can also select columns and rows from these rows using .loc(). This is called "slicing". Notice that I take from column Test_1 to Test_3:
df.loc[:, 'Test_1':'Test_3']
The "Slice" is:
Test_1 Test_2 Test_3
Jane 1 2 5
Peter 5 4 5
Alex 7 7 8
Ann 7 6 9
And if you just want Peter and Ann from columns Test_1 and Test_3:
df.loc[['Peter', 'Ann'], ['Test_1', 'Test_3']]
You get:
Test_1 Test_3
Peter 5 5
Ann 7 9
If you want to get one element by row index and column name, you can do it just like df['b'][0]. It is as simple as you can imagine.
Or you can use df.ix[0,'b'] - mixed usage of index and label.
Note: Since v0.20, ix has been deprecated in favour of loc / iloc.
df[['a', 'b']] # Select all rows of 'a' and 'b'column
df.loc[0:10, ['a', 'b']] # Index 0 to 10 select column 'a' and 'b'
df.loc[0:10, 'a':'b'] # Index 0 to 10 select column 'a' to 'b'
df.iloc[0:10, 3:5] # Index 0 to 10 and column 3 to 5
df.iloc[3, 3:5] # Index 3 of column 3 to 5
Try to use pandas.DataFrame.get (see the documentation):
import pandas as pd
import numpy as np
dates = pd.date_range('20200102', periods=6)
df = pd.DataFrame(np.random.randn(6, 4), index=dates, columns=list('ABCD'))
df.get(['A', 'C'])
One different and easy approach: iterating rows
Using iterows
df1 = pd.DataFrame() # Creating an empty dataframe
for index,i in df.iterrows():
df1.loc[index, 'A'] = df.loc[index, 'A']
df1.loc[index, 'B'] = df.loc[index, 'B']
df1.head()
The different approaches discussed in the previous answers are based on the assumption that either the user knows column indices to drop or subset on, or the user wishes to subset a dataframe using a range of columns (for instance between 'C' : 'E').
pandas.DataFrame.drop() is certainly an option to subset data based on a list of columns defined by user (though you have to be cautious that you always use copy of dataframe and inplace parameters should not be set to True!!)
Another option is to use pandas.columns.difference(), which does a set difference on column names, and returns an index type of array containing desired columns. Following is the solution:
df = pd.DataFrame([[2,3,4], [3,4,5]], columns=['a','b','c'], index=[1,2])
columns_for_differencing = ['a']
df1 = df.copy()[df.columns.difference(columns_for_differencing)]
print(df1)
The output would be:
b c
1 3 4
2 4 5
You can also use df.pop():
>>> df = pd.DataFrame([('falcon', 'bird', 389.0),
... ('parrot', 'bird', 24.0),
... ('lion', 'mammal', 80.5),
... ('monkey', 'mammal', np.nan)],
... columns=('name', 'class', 'max_speed'))
>>> df
name class max_speed
0 falcon bird 389.0
1 parrot bird 24.0
2 lion mammal 80.5
3 monkey mammal
>>> df.pop('class')
0 bird
1 bird
2 mammal
3 mammal
Name: class, dtype: object
>>> df
name max_speed
0 falcon 389.0
1 parrot 24.0
2 lion 80.5
3 monkey NaN
Please use df.pop(c).
I've seen several answers on that, but one remained unclear to me. How would you select those columns of interest?
The answer to that is that if you have them gathered in a list, you can just reference the columns using the list.
Example
print(extracted_features.shape)
print(extracted_features)
(63,)
['f000004' 'f000005' 'f000006' 'f000014' 'f000039' 'f000040' 'f000043'
'f000047' 'f000048' 'f000049' 'f000050' 'f000051' 'f000052' 'f000053'
'f000054' 'f000055' 'f000056' 'f000057' 'f000058' 'f000059' 'f000060'
'f000061' 'f000062' 'f000063' 'f000064' 'f000065' 'f000066' 'f000067'
'f000068' 'f000069' 'f000070' 'f000071' 'f000072' 'f000073' 'f000074'
'f000075' 'f000076' 'f000077' 'f000078' 'f000079' 'f000080' 'f000081'
'f000082' 'f000083' 'f000084' 'f000085' 'f000086' 'f000087' 'f000088'
'f000089' 'f000090' 'f000091' 'f000092' 'f000093' 'f000094' 'f000095'
'f000096' 'f000097' 'f000098' 'f000099' 'f000100' 'f000101' 'f000103']
I have the following list/NumPy array extracted_features, specifying 63 columns. The original dataset has 103 columns, and I would like to extract exactly those, then I would use
dataset[extracted_features]
And you will end up with this
This something you would use quite often in machine learning (more specifically, in feature selection). I would like to discuss other ways too, but I think that has already been covered by other Stack Overflower users.
To exclude some columns you can drop them in the column index. For example:
A B C D
0 1 10 100 1000
1 2 20 200 2000
Select all except two:
df[df.columns.drop(['B', 'D'])]
Output:
A C
0 1 100
1 2 200
You can also use the method truncate to select middle columns:
df.truncate(before='B', after='C', axis=1)
Output:
B C
0 10 100
1 20 200
To select multiple columns, extract and view them thereafter: df is the previously named data frame. Then create a new data frame df1, and select the columns A to D which you want to extract and view.
df1 = pd.DataFrame(data_frame, columns=['Column A', 'Column B', 'Column C', 'Column D'])
df1
All required columns will show up!
def get_slize(dataframe, start_row, end_row, start_col, end_col):
assert len(dataframe) > end_row and start_row >= 0
assert len(dataframe.columns) > end_col and start_col >= 0
list_of_indexes = list(dataframe.columns)[start_col:end_col]
ans = dataframe.iloc[start_row:end_row][list_of_indexes]
return ans
Just use this function
I think this is the easiest way to reach your goal.
import pandas as pd
cols = ['a', 'b']
df1 = pd.DataFrame(df, columns=cols)
df1 = df.iloc[:, 0:2]