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I am trying to achieve the following:
# Before
raw = np.array([0, 1, 2, 3, 4, 5, 6, 7, 8, 9])
# Set values to 10
indice_set1 = np.array([0, 2, 4])
indice_set2 = np.array([0, 1])
raw[indice_set1][indice_set2] = 10
# Result
print(raw)
[0, 1, 2, 3, 4, 5, 6, 7, 8, 9]
But the raw values remain exactly the same.
Expecting this:
# After
raw = np.array([10, 1, 10, 3, 4, 5, 6, 7, 8, 9])
After doing raw[indice_set1] you get a new array, which is the one you modify with the second slicing, not raw.
Instead, slice the slicer:
raw[indice_set1[indice_set2]] = 10
Modified raw:
array([10, 1, 10, 3, 4, 5, 6, 7, 8, 9])
I am finding outliers from a column and storing them in a list. Now i want to delete all the values which
are present in my list from the column.
How can achieve this ?
This is my function for finding outliers
outlier=[]
def detect_outliers(data):
threshold=3
m = np.mean(data)
st = np.std(data)
for i in data:
#calculating z-score value
z_score=(i-m)/st
#if the z_score value is greater than threshold value than its a outlier
if np.abs(z_score)>threshold:
outlier.append(i)
return outlier
This is my column in data frame
df_train_11.AMT_INCOME_TOTAL
import numpy as np, pandas as pd
df = pd.DataFrame(np.random.rand(10,5))
outlier_list=[]
def detect_outliers(data):
threshold=0.5
for i in data:
#calculating z-score value
z_score=(df.loc[:,i]- np.mean(df.loc[:,i])) /np.std(df.loc[:,i])
outliers = np.abs(z_score)>threshold
outlier_list.append(df.index[outliers].tolist())
return outlier_list
outlier_list = detect_outliers(df)
[[1, 2, 4, 5, 6, 7, 9],
[0, 1, 2, 3, 4, 5, 6, 7, 8, 9],
[0, 1, 2, 4, 8],
[0, 1, 3, 4, 6, 8],
[0, 1, 3, 5, 6, 8, 9]]
This way, you get the outliers of each column. outlier_list[0] gives you [1, 2, 4, 5, 6, 7, 9] which means that the rows 1,2,etc are outliers for column 0.
EDIT
Shorter answer:
df = pd.DataFrame(np.random.randn(10, 3), columns=list('ABC'))
df[((df.B - df.B.mean()) / df.B.std()).abs() < 3]
This willfilter the DataFrame where only ONE column (e.g. 'B') is within three standard deviations.
lookup = np.array([60, 40, 50, 60, 90])
The values in the following arrays are equal to indices of lookup.
a = np.array([1, 2, 0, 4, 3, 2, 4, 2, 0])
b = np.array([0, 1, 2, 3, 3, 4, 1, 2, 1])
c = np.array([4, 2, 1, 4, 4, 0, 4, 4, 2])
array 1st column elements lookup value
a 1 --> 40
b 0 --> 60
c 4 --> 90
Maximum is 90.
So, first element of result is 4.
This way,
expected result = array([4, 2, 0, 4, 4, 4, 4, 4, 0])
How to get it?
I tried as:
d = np.vstack([a, b, c])
print (d)
res = lookup[d]
res = np.max(res, axis = 0)
print (d[enumerate(lookup)])
I got error
IndexError: only integers, slices (:), ellipsis (...), numpy.newaxis (None) and integer or boolean arrays are valid indices
Do you want this:
d = np.vstack([a,b,c])
# option 1
rows = lookup[d].argmax(0)
d[rows, np.arange(d.shape[1])]
# option 2
(lookup[:,None] == lookup[d].max(0)).argmax(0)
Output:
array([4, 2, 0, 4, 4, 4, 4, 4, 0])
Lets say I have a Python Numpy array a.
a = numpy.array([1,2,3,4,5,6,7,8,9,10,11])
I want to create a matrix of sub sequences from this array of length 5 with stride 3. The results matrix hence will look as follows:
numpy.array([[1,2,3,4,5],[4,5,6,7,8],[7,8,9,10,11]])
One possible way of implementing this would be using a for-loop.
result_matrix = np.zeros((3, 5))
for i in range(0, len(a), 3):
result_matrix[i] = a[i:i+5]
Is there a cleaner way to implement this in Numpy?
Approach #1 : Using broadcasting -
def broadcasting_app(a, L, S ): # Window len = L, Stride len/stepsize = S
nrows = ((a.size-L)//S)+1
return a[S*np.arange(nrows)[:,None] + np.arange(L)]
Approach #2 : Using more efficient NumPy strides -
def strided_app(a, L, S ): # Window len = L, Stride len/stepsize = S
nrows = ((a.size-L)//S)+1
n = a.strides[0]
return np.lib.stride_tricks.as_strided(a, shape=(nrows,L), strides=(S*n,n))
Sample run -
In [143]: a
Out[143]: array([ 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11])
In [144]: broadcasting_app(a, L = 5, S = 3)
Out[144]:
array([[ 1, 2, 3, 4, 5],
[ 4, 5, 6, 7, 8],
[ 7, 8, 9, 10, 11]])
In [145]: strided_app(a, L = 5, S = 3)
Out[145]:
array([[ 1, 2, 3, 4, 5],
[ 4, 5, 6, 7, 8],
[ 7, 8, 9, 10, 11]])
Starting in Numpy 1.20, we can make use of the new sliding_window_view to slide/roll over windows of elements.
And coupled with a stepping [::3], it simply becomes:
from numpy.lib.stride_tricks import sliding_window_view
# values = np.array([1,2,3,4,5,6,7,8,9,10,11])
sliding_window_view(values, window_shape = 5)[::3]
# array([[ 1, 2, 3, 4, 5],
# [ 4, 5, 6, 7, 8],
# [ 7, 8, 9, 10, 11]])
where the intermediate result of the sliding is:
sliding_window_view(values, window_shape = 5)
# array([[ 1, 2, 3, 4, 5],
# [ 2, 3, 4, 5, 6],
# [ 3, 4, 5, 6, 7],
# [ 4, 5, 6, 7, 8],
# [ 5, 6, 7, 8, 9],
# [ 6, 7, 8, 9, 10],
# [ 7, 8, 9, 10, 11]])
Modified version of #Divakar's code with checking to ensure that memory is contiguous and that the returned array cannot be modified. (Variable names changed for my DSP application).
def frame(a, framelen, frameadv):
"""frame - Frame a 1D array
a - 1D array
framelen - Samples per frame
frameadv - Samples between starts of consecutive frames
Set to framelen for non-overlaping consecutive frames
Modified from Divakar's 10/17/16 11:20 solution:
https://stackoverflow.com/questions/40084931/taking-subarrays-from-numpy-array-with-given-stride-stepsize
CAVEATS:
Assumes array is contiguous
Output is not writable as there are multiple views on the same memory
"""
if not isinstance(a, np.ndarray) or \
not (a.flags['C_CONTIGUOUS'] or a.flags['F_CONTIGUOUS']):
raise ValueError("Input array a must be a contiguous numpy array")
# Output
nrows = ((a.size-framelen)//frameadv)+1
oshape = (nrows, framelen)
# Size of each element in a
n = a.strides[0]
# Indexing in the new object will advance by frameadv * element size
ostrides = (frameadv*n, n)
return np.lib.stride_tricks.as_strided(a, shape=oshape,
strides=ostrides, writeable=False)
We have a Tensor of unknown length N, containing some int32 values.
How can we generate another Tensor that will contain N ranges concatenated together, each one between 0 and the int32 value from the original tensor ?
For example, if we have [4, 4, 5, 3, 1], the output Tensor should look like [0 1 2 3 0 1 2 3 0 1 2 3 4 0 1 2 0].
Thank you for any advice.
You can make this work with a tensor as input by using a tf.RaggedTensor which can contain dimensions of non-uniform length.
# Or any other N length tensor
tf_counts = tf.convert_to_tensor([4, 4, 5, 3, 1])
tf.print(tf_counts)
# [4 4 5 3 1]
# Create a ragged tensor, each row is a sequence of length tf_counts[i]
tf_ragged = tf.ragged.range(tf_counts)
tf.print(tf_ragged)
# <tf.RaggedTensor [[0, 1, 2, 3], [0, 1, 2, 3], [0, 1, 2, 3, 4], [0, 1, 2], [0]]>
# Read values
tf.print(tf_ragged.flat_values, summarize=-1)
# [0 1 2 3 0 1 2 3 0 1 2 3 4 0 1 2 0]
For this 2-dimensional case the ragged tensor tf_ragged is a “matrix“ of rows with varying length:
[[0, 1, 2, 3],
[0, 1, 2, 3],
[0, 1, 2, 3, 4],
[0, 1, 2],
[0]]
Check tf.ragged.range for more options on how to create the sequences on each row: starts for inclusive lower limits, limits for exclusive upper limit, deltas for increment. Each may vary for each sequence.
Also mind that the dtype of the tf_counts tensor will propagate to the final values.
If you want to have everything as a tensorflow object, then use tf.range() along with tf.concat().
In [88]: vals = [4, 4, 5, 3, 1]
In [89]: tf_range = [tf.range(0, limit=item, dtype=tf.int32) for item in vals]
# concat all `tf_range` objects into a single tensor
In [90]: concatenated_tensor = tf.concat(tf_range, 0)
In [91]: concatenated_tensor.eval()
Out[91]: array([0, 1, 2, 3, 0, 1, 2, 3, 0, 1, 2, 3, 4, 0, 1, 2, 0], dtype=int32)
There're other approaches to do this as well. Here, I assume that you want a constant tensor but you can construct any tensor once you have the full range list.
First, we construct the full range list using a list comprehension, make a flat list out of it, and then construct a tensor.
In [78]: from itertools import chain
In [79]: vals = [4, 4, 5, 3, 1]
In [80]: range_list = list(chain(*[range(item) for item in vals]))
In [81]: range_list
Out[81]: [0, 1, 2, 3, 0, 1, 2, 3, 0, 1, 2, 3, 4, 0, 1, 2, 0]
In [82]: const_tensor = tf.constant(range_list, dtype=tf.int32)
In [83]: const_tensor.eval()
Out[83]: array([0, 1, 2, 3, 0, 1, 2, 3, 0, 1, 2, 3, 4, 0, 1, 2, 0], dtype=int32)
On the other hand, we can also use tf.range() but then it returns an array when you evaluate it. So, you'd have to construct the list from the arrays and then make a flat list out of it and finally construct the tensor as in the following example.
list_of_arr = [tf.range(0, limit=item, dtype=tf.int32).eval() for item in vals]
range_list = list(chain(*[arr.tolist() for arr in list_of_arr]))
# output
[0, 1, 2, 3, 0, 1, 2, 3, 0, 1, 2, 3, 4, 0, 1, 2, 0]
const_tensor = tf.constant(range_list, dtype=tf.int32)
const_tensor.eval()
#output tensor as numpy array
array([0, 1, 2, 3, 0, 1, 2, 3, 0, 1, 2, 3, 4, 0, 1, 2, 0], dtype=int32)