Read of text file never being released from memory - vb.net

I'm using .NET Framework 4.6.2 (VB) for a Windows Service. I'm using NLog to write a log file without issue. I'm now adding a log viewer utility which will show the last 100 lines of the log file. I've used various methods to read the file but can't seem to escape the reality that I eventually need to iterate through the entire file to get to the lines that I need. That's not a problem.
Where I'm having an issue is that after I've finished reading the file it NEVER seems to get released from memory. When I start my application, it's using approximately 16MB of memory. After the read (of an at most 10MB file) it's using around 38.5MB. Even doing things like clearing the List(Of String) or a forced Garbage Collection is never fully releasing the memory.
I'm using probably the simplest version of a read:
Dim LogEntries As List(Of String) = System.IO.File.ReadLines(LogFile).ToList()
LogEntries.Clear()
I am performing other tasks between the ReadLines and LogEntries.Clear() steps, but the issue is present even if I use only the lines shown above.
I would expect that on clearing the LogEntries list would return the memory usage to approximately 16MB, but the lowest I've been able to get it (after a GC.Collect()) is about 22MB. Can anyone explain this to me?

The whole point of calling ReadLines is that it doesn't read every line at the same time. If you then call ToList on the result then you force it to wait until all lines are read. That's silly. If you want the last 100 lines then you have no choice but to read the whole lot but there's no point keeping it all.
Dim lines = File.ReadAllLines(filePath)
lines = lines.Skip(lines.Length - 100).ToArray()
The first line reads the entire file into a String array and then the second line creates a second array containing just the last 100 elements and discards the first array.
Another option that would reduce memory consumption at the expense of performance would be this:
Dim lines As New List(Of String)
Using reader As New StreamReader(filePath)
Do Until reader.EndOfStream
lines.Add(reader.ReadLine())
If lines.Count > 100 Then
lines.RemoveAt(0)
End If
Loop
End Using

Related

VB.NET (2013) - Check string against huge file

I have a text file that is 125Mb in size, it contains 2.2 million records. I have another text file which doesn't match the original but I need to find out where it differs. Normally, with a smaller file I would read each line and process it in some way, or read the whole file into a string and do likewise, however the two files are too big for that and so I would like to create something to achieve my goal. Here's what I currently have.. excuse the mess of it.
Private Sub refUpdateBtn_Click(sender As Object, e As EventArgs) Handles refUpdateBtn.Click
Dim refOrig As String = refOriginalText.Text 'Original Reference File
Dim refLatest As String = refLatestText.Text 'Latest Reference
Dim srOriginal As StreamReader = New StreamReader(refOrig) 'start stream of original file
Dim srLatest As StreamReader = New StreamReader(refLatest) 'start stream of latest file
Dim recOrig, recLatest, baseDIR, parentDIR, recOutFile As String
baseDIR = vb.Left(refOrig, InStrRev(refOrig, ".ref") - 1) 'find parent folder
parentDIR = Path.GetDirectoryName(baseDIR) & "\"
recOutFile = parentDIR & "Updated.ref"
Me.Text = "Processing Reference File..." 'update the application
Update()
If Not File.Exists(recOutFile) Then
FileOpen(55, recOutFile, OpenMode.Append)
FileClose(55)
End If
Dim x As Integer = 0
Do While srLatest.Peek() > -1
Application.DoEvents()
recLatest = srLatest.ReadLine
recOrig = srOriginal.ReadLine ' check the original reference file
Do
If Not recLatest.Equals(recOrig) Then
recOrig = srOriginal.ReadLine
Else
FileOpen(55, recOutFile, OpenMode.Append)
Print(55, recLatest & Environment.NewLine)
FileClose(55)
x += 1
count.Text = "Record No: " & x
count.Refresh()
srOriginal.BaseStream.Seek(0, SeekOrigin.Begin)
GoTo 1
End If
Loop
1:
Loop
srLatest.Close()
srOriginal.Close()
FileClose(55)
End Sub
It's got poor programming and scary loops, but that's because I'm not a professional coder, just a guy trying to make his life easier.
Currently, this uses a form to insert the original file and the latest file and outputs each line that matches into a new file. This is less than perfect, but I don't know how to cope with the large file sizes as streamreader.readtoend crashes the program. I also don't need the output to be a copy of the latest input, but I don't know how to only output the records it doesn't find. Here's a sample of the records each file has:
doc:ARCHIVE.346CCBD3B06711E0B40E00163505A2EF
doc:ARCHIVE.346CE683B29811E0A06200163505A2EF
doc:ARCHIVE.346CEB15A91711E09E8900163505A2EF
doc:ARCHIVE.346CEC6AAA6411E0BEBB00163505A2EF
The program I have currently works... to a fashion, however I know there are better ways of doing it and I'm sure much better ways of using the CPU and memory, but I don't know this level of programming. All I would like is for you to take a look and offer your best answers to all or some of the code. Tell me what you think will make it better, what will help with one line, or all of it. I have no time limit on this because the code works, albeit slowly, I would just like someone to tell me where my code could be better and what I could do to get round the huge file sizes.
Your code is slow because it is doing a lot of file IO. You're on the right track by reading one line at a time, but this can be improved.
Firstly, I've created some test files based off the data that you provided. Those files contain three million lines and are about 130 MB in size (2.2 million records was less than 100 MB so I've increased the number of lines to get to the file size that you state).
Reading the entire file into a single string uses up about 600 MB of memory. Do this with two files (which I assume you were doing) and you have over 1GB of memory used, which may have been causing the crash (you don't say what error was shown, if any, when the crash occurred, so I can only assume that it was an OutOfMemoryException).
Here's a few tips before I go through your code:
Use Using Blocks
This won't help with performance, but it does make your code cleaner and easier to read.
Whenever you're dealing with a file (or anything that implements the IDisposable interface), it's always a good idea to use a Using statement. This will automatically dispose of the file (which closes the file), even if an error happens.
Don't use FileOpen
The FileOpen method is outdated (and even stated as being slow in its documentation). There are better alternatives that you are already (almost) using: StreamWriter (the cousin of StreamReader).
Opening and closing a file two million times (like you are doing inside your loop) won't be fast. This can be improved by opening the file once outside the loop.
DoEvents() is evil!
DoEvents is a legacy method from back in the VB6 days, and it's something that you really want to avoid, especially when you're calling it two million times in a loop!
The alternative is to perform all of your file processing on a separate thread so that your UI is still responsive.
Using a separate thread here is probably overkill, and there are a number of intricacies that you need to be aware of, so I have not used a separate thread in the code below.
So let's look at each part of your code and see what we can improve.
Creating the output file
You're almost right here, but you're doing some things that you don't need to do. GetDirectoryName works with file names, so there's no need to remove the extension from the original file name first. You can also use the Path.Combine method to combine a directory and file name.
recOutFile = Path.Combine(Path.GetDirectoryName(refOrig), "Updated.ref")
Reading the files
Since you're looping through each line in the "latest" file and finding a match in the "original" file, you can continue to read one line at a time from the "latest" file.
But instead of reading a line at a time from the "original" file, then seeking back to the start when you find a match, you will be better off reading all of those lines into memory.
Now, instead of reading the entire file into memory (which took up 600 MB as I mentioned earlier), you can read each line of the file into an array. This will use up less memory, and is quite easy to do thanks to the File class.
originalLines = File.ReadAllLines(refOrig)
This reads all of the lines from the file and returns a String array. Searching through this array for matches will be slow, so instead of reading into an array, we can read into a HashSet(Of String). This will use up a bit more memory, but it will be much faster to seach through.
originalLines = New HashSet(Of String)(File.ReadAllLines(refOrig))
Searching for matches
Since we now have all of the lines from the "original" line in an array or HashSet, searching for a line is very easy.
originalLines.Contains(recLatest)
Putting it all together
So let's put all of this together:
Private Sub refUpdateBtn_Click(sender As Object, e As EventArgs)
Dim refOrig As String
Dim refLatest As String
Dim recOutFile As String
Dim originalLines As HashSet(Of String)
refOrig = refOriginalText.Text 'Original Reference File
refLatest = refLatestText.Text 'Latest Reference
recOutFile = Path.Combine(Path.GetDirectoryName(refOrig), "Updated.ref")
Me.Text = "Processing Reference File..." 'update the application
Update()
originalLines = New HashSet(Of String)(File.ReadAllLines(refOrig))
Using latest As New StreamReader(refLatest),
updated As New StreamWriter(recOutFile, True)
Do
Dim line As String
line = latest.ReadLine()
' ReadLine returns Nothing when it reaches the end of the file.
If line Is Nothing Then
Exit Do
End If
If originalLines.Contains(line) Then
updated.WriteLine(line)
End If
Loop
End Using
End Sub
This uses around 400 MB of memory and takes about 4 seconds to run.

Avoid updating textbox in real time in vb.net

I have a very simple code in a VB.NET program to load all paths in a folder in a text box. The code works great, the problem is that it adds the lines in real time, so it takes about 3 minutes to load 20k files while the interface is displaying line by line.
This is my code:
Dim ImageryDB As String() = IO.Directory.GetFiles("c:\myimages\")
For Each image In ImageryDB
txtbAllimg.AppendText(image & vbCrLf)
Next
How can I force my program to load the files in chunks or update the interface every second?
Thanks in advance
Yes, you can do that. You'll need to load the file names into an off-screen data structure of some kind rather than loading them directly into the control. Then you can periodically update the control to display whatever is loaded so far. However, I think you'll find that the slowness comes only from updating the control. Once you remove that part, there will be no need to update the control periodically during the loading process since it will be nearly instantaneous.
You could just load all of the file names into a string and then only set the text box to that string after it's been fully loaded, like this:
Dim imagePaths As String = ""
For Each image As String In Directory.GetFiles("c:\myimages\")
imagePaths &= image & Environment.NewLine
Next
txtbAllimg.Text = imagePaths
However, that's not as efficient as using the StringBuilder:
Dim imagePaths As New StringBuilder()
For Each image As String In Directory.GetFiles("c:\myimages\")
imagePaths.AppendLine(image)
Next
txtbAllimg.Text = imagePaths.ToString()
However, since the GetFiles method is already returning the complete list of paths to you as a string array, it would be even more convenient (and likely even more efficient) to just use the String.Join method to combine all of the items in the array into a single string:
txtbAllimg.Text = String.Join(Environment.NewLine, Directory.GetFiles("c:\myimages\"))
I know that this is not an answer to your actual question, but AppendText is slow. Using a ListBox and Adding the items to it is approx. 3 times faster. The ListBox also has the benefit of being able to select an item easily (at least more easily than a TextBox)
For each image in ImageryDB
Me.ListBox1.Items.add (image)
Next
However, there is probably an even more useful and faster way to do this. Using FileInfo.
Dim dir As New IO.DirectoryInfo("C:\myImages")
Dim fileInfoArray As IO.FileInfo() = dir.GetFiles()
Dim fileInfo As IO.FileInfo
For Each fileInfo In fileInfoArray
Me.ListBox2.Items.Add(fileInfo.Name)
Next

A faster way to read lines in text files quickly

My application is looking at huge text files (upwards to half a million lines) from a proxy server log. The problem is that a normal StreamRead iteration of the logs can take an excessive amount of time to process, so I'm looking for something faster.
On the form, the user picks the file they need to parse and enters up to three site filters to check for. The application then opens the file and begins to parse the date stamp and website URL from each line in the file. The average speed is about two lines per second, so for a file with 200,000 lines in it, this process will take about 28 hours to process a file.
I've been reading on the Task class, and I'm thinking this would probably be the route to take, but Microsoft doesn't give a very good example, so how can I can accomplish it?
I think you could use File.ReadLines() when reading large files.
According to MSDN :
The ReadLines and ReadAllLines methods differ as follows: When you use ReadLines, you can start enumerating the collection of strings before the whole collection is returned; when you use ReadAllLines, you must wait for the whole array of strings be returned before you can access the array. Therefore, when you are working with very large files, ReadLines can be more efficient.
For more detail, see MSDN File.ReadLines()
Instead of guessing about why it is slow, is it reading the file, processing the lines, etc. start by measuring how long it takes to read the file line-by-line.
Private Sub Button1_Click(sender As Object, e As EventArgs) Handles Button1.Click
Dim stpw As New Stopwatch
Dim path As String = "path to your file here"
Dim sr As New IO.StreamReader(path)
Dim linect As Integer = 0
stpw.Restart()
Do While Not sr.EndOfStream
Dim s As String = sr.ReadLine
linect += 1
Loop
stpw.Stop()
sr.Close()
Debug.WriteLine(stpw.Elapsed.ToString)
Debug.WriteLine(linect)
End Sub
I ran this against a test file I have that is 20MB. It is close to 3,000,000 lines long(the lines are very short). It took about .3 of a second to run.
After you run this you will know whether the problem is the read or the processing, or both.
Thanks, dbasnett... the results were:
00:00:00.6991336
172900
Believe it or not, I found the problem. I had the textbox inside a GroupBox and was using the GroupBox.Text property to update statistics back to the user, using GroupBox.Refresh() to update the line x of y and matches found, etc. so the user had some idea of what was being found.
By leaving that information out and putting in a progress bar, the speed of the scans went up exponentially. Using 3 filters, I was able to parse 172900 lines in a matter of 3:19 minutes:
Scan complete!
Process complete!
Scanned 172900 lines out of 172900 lines.
Percentage (icc): 0.0052% (900 matches)
Percentage (facebook): 0.0057% (988 matches)
Percentage (illinois): 0.0005% (95 matches)
Total Matches: 1983
Elapsed Time: 00:03:19.1088851

Ionic.Zip (DotNetZip) hangs with in save method with IO.MemoryStream

I'll try to create an zip file with the DotNetZip-Libary with 106 Images (675MB) with the following code:
Public Function GetZip() As Byte()
Dim zip As New Ionic.Zip.ZipFile(String.Format("{0}.zip", Me.GallerySystemName))
AddHandler zip.SaveProgress, AddressOf SaveProgress
For Each img In Me.Images
zip.AddFile(img.OriginalFile.FullName, "")
Next
Dim bytZip As Byte()
Using ms As New MemoryStream
zip.Save(ms)
bytZip = ms.ToArray
End Using
Return bytZip
End Function
When I run this code, the execution stops usally at image 40 (sometimes earlier) without any exeption. Nothing happens. I tried to save the zip directly to a file. It works.
Any ideas?
Jan
SET the zip object property ParallelDeflateThreshold to -1 just before saving the zip file
zip.ParallelDeflateThreshold = -1
REF: http://forums.codeguru.com/showthread.php?534177-Issue-with-DotNetZip-ionic.zip-class-hanging-on-save
It's been almost 2 years since your question, so I doubt this will help but I just encountered the same problem in v1.9.1.8.
I worked around it by increasing the BufferSize and CodecBufferSize ZipFile properties to 1MB each.
I can't download the DotNetZip source because of filters at work but here is a very-likely-related comment from http://dotnetzip.codeplex.com/releases/view/68268
There is a pretty major bug in the code. I am working to figure it out. Another chap logged it before me: Deadlock in ParallelDeflateOutputStream.EmitPendingBuffers The zip hangs. End-of-day I will have to rip this code out and start over with a new library. I need to call my last job and give them a head's up b/c I used this library at my last job. They will likely have to rip the code out too.
by jnarkiewicz on May 30 at 6:31 PM
So if this is indeed the problem, increasing the size of those buffers just lowers the likelihood of the deadlock occurring and is not an ideal solution.

Loop takes forever with large count

This loop takes forever to run as the amount of items in the loop approach anything close to and over 1,000, close to like 10 minutes. This needs to run fast for amounts all the way up to like 30-40 thousand.
'Add all Loan Record Lines
Dim loans As List(Of String) = lar.CreateLoanLines()
Dim last As Integer = loans.Count - 1
For i = 0 To last
If i = last Then
s.Append(loans(i))
Else
s.AppendLine(loans(i))
End If
Next
s is a StringBuilder. The first line there
Dim loans As List(Of String) = lar.CreateLoanLines()
Runs in only a few seconds even with thousands of records. It's the actual loop that's taking a while.
How can this be optimized???
Set the initial capacity of your StringBuilder to a large value. (Ideally, large enough to contain the entire final string.) Like so:
s = new StringBuilder(loans.Count * averageExpectedStringSize)
If you don't specify a capacity, the builder will likely end up doing a large amount of internal reallocations, and this will kill performance.
You could take the special case out of the loop, so you wouldn't need to be checking it inside the loop. I would expect this to have almost no impact on performance, however.
For i = 0 To last - 1
s.AppendLine(loans(i))
Next
s.Append(loans(last))
Though, internally, the code is very similar, if you're using .NET 4, I'd consider replacing your method with a single call to String.Join:
Dim result as String = String.Join(Envionment.NewLine, lar.CreateLoanLines())
I can't see how the code you have pointed out could be slow unless:
The strings you are dealing with are huggggge (e.g. if the resulting string is 1 gigabyte).
You have another process running on your machine consuming all your clock cycles.
You haven't got enough memory in your machine.
Try stepping through the code line by line and check that the strings contain the data that you expect, and check Task Manager to see how much memory your application is using and how much free memory you have.
My guess would be that every time you're using append it's creating a new string. You seem to know how much memory you'll need, if you allocate all of the memory first and then just copy it into memory it should run much faster. Although I may be confused as to how vb.net works.
You could look at doing this another way.
Dim str As String = String.Join(Environment.NewLine, loans.ToArray)