The TF version is 1.9.0 and cython version is 0.28.4, when import tensorflow.contrib.layers as layers, there is an error occured,
Traceback (most recent call last):
File "train.py", line 9, in <module>
import tensorflow.contrib.layers as layers
File "/usr/local/lib/python3.5/dist-packages/tensorflow/contrib/__init__.py", line 39, in <module>
from tensorflow.contrib import distributions
File "/usr/local/lib/python3.5/dist-packages/tensorflow/contrib/distributions/__init__.py", line 40, in <module>
from tensorflow.contrib.distributions.python.ops.estimator import *
File "/usr/local/lib/python3.5/dist-packages/tensorflow/contrib/distributions/python/ops/estimator.py", line 21, in <module>
from tensorflow.contrib.learn.python.learn.estimators.head import _compute_weighted_loss
File "/usr/local/lib/python3.5/dist-packages/tensorflow/contrib/learn/__init__.py", line 95, in <module>
from tensorflow.contrib.learn.python.learn import *
File "/usr/local/lib/python3.5/dist-packages/tensorflow/contrib/learn/python/__init__.py", line 28, in <module>
from tensorflow.contrib.learn.python.learn import *
File "/usr/local/lib/python3.5/dist-packages/tensorflow/contrib/learn/python/learn/__init__.py", line 30, in <module>
from tensorflow.contrib.learn.python.learn import estimators
File "/usr/local/lib/python3.5/dist-packages/tensorflow/contrib/learn/python/learn/estimators/__init__.py", line 302, in <module>
from tensorflow.contrib.learn.python.learn.estimators.dnn import DNNClassifier
File "/usr/local/lib/python3.5/dist-packages/tensorflow/contrib/learn/python/learn/estimators/dnn.py", line 35, in <module>
from tensorflow.contrib.learn.python.learn.estimators import dnn_linear_combined
File "/usr/local/lib/python3.5/dist-packages/tensorflow/contrib/learn/python/learn/estimators/dnn_linear_combined.py", line 36, in <module>
from tensorflow.contrib.learn.python.learn.estimators import estimator
File "/usr/local/lib/python3.5/dist-packages/tensorflow/contrib/learn/python/learn/estimators/estimator.py", line 52, in <module>
from tensorflow.contrib.learn.python.learn.learn_io import data_feeder
File "/usr/local/lib/python3.5/dist-packages/tensorflow/contrib/learn/python/learn/learn_io/__init__.py", line 26, in <module>
from tensorflow.contrib.learn.python.learn.learn_io.dask_io import extract_dask_data
File "/usr/local/lib/python3.5/dist-packages/tensorflow/contrib/learn/python/learn/learn_io/dask_io.py", line 33, in <module>
import dask.dataframe as dd
File "/usr/local/lib/python3.5/dist-packages/dask/dataframe/__init__.py", line 3, in <module>
from .core import (DataFrame, Series, Index, _Frame, map_partitions,
File "/usr/local/lib/python3.5/dist-packages/dask/dataframe/core.py", line 20, in <module>
from .. import array as da
File "/usr/local/lib/python3.5/dist-packages/dask/array/__init__.py", line 4, in <module>
from .core import (Array, block, concatenate, stack, from_array, store,
File "/usr/local/lib/python3.5/dist-packages/dask/array/core.py", line 50, in <module>
from ..bytes.core import get_mapper, get_fs_token_paths
File "/usr/local/lib/python3.5/dist-packages/dask/bytes/__init__.py", line 4, in <module>
from .core import read_bytes, open_files, open_text_files
File "/usr/local/lib/python3.5/dist-packages/dask/bytes/core.py", line 10, in <module>
from .compression import seekable_files, files as compress_files
File "/usr/local/lib/python3.5/dist-packages/dask/bytes/compression.py", line 31, in <module>
import snappy
File "/usr/local/lib/python3.5/dist-packages/snappy/__init__.py", line 7, in <module>
from .SnapPy import (AbelianGroup, HolonomyGroup, FundamentalGroup,
File "cython/core/basic.pyx", line 45, in init SnapPy
File "/usr/local/lib/python3.5/dist-packages/snappy/horoviewer.py", line 3, in <module>
from .CyOpenGL import *
File "opengl/CyOpenGL.pyx", line 36, in init CyOpenGL
AttributeError: type object 'CyOpenGL.vector3' has no attribute '__reduce_cython__'
I thought there is something wrong with Cython's verion, but I am not sure since. How can I fix it?
Now, I can not figure out how did this error come out, but still, there is a workaround that is using tf.layers.dense to replace it
tf.layers.dense(...) # tf.contrib.layers.fully_connected(...)
This error is nasty when you don't have root permission to update dependencies.
Reference:
Are tf.layers.dense() and tf.contrib.layers.fully_connected() interchangeable?
Related
When I start the tutorial it shows an error. I am using windows 11 64 bit. I installed all the packages through anaconda, and I can’t understand what the problem could be. (Python 3.9)
Traceback (most recent call last):
File "C:\Users\iirof\PycharmProjects\rf_detect_mob\yolov7-custom\train.py", line 24, in <module>
import test # import test.py to get mAP after each epoch
File "C:\Users\iirof\PycharmProjects\rf_detect_mob\yolov7-custom\test.py", line 12, in <module>
from models.experimental import attempt_load
File "C:\Users\iirof\PycharmProjects\rf_detect_mob\yolov7-custom\models\experimental.py", line 6, in <module>
from models.common import Conv, DWConv
File "C:\Users\iirof\PycharmProjects\rf_detect_mob\yolov7-custom\models\common.py", line 17, in <module>
from utils.plots import color_list, plot_one_box
File "C:\Users\iirof\PycharmProjects\rf_detect_mob\yolov7-custom\utils\plots.py", line 19, in <module>
from scipy.signal import butter, filtfilt
File "C:\Users\iirof\anaconda3\envs\rf\lib\site-packages\scipy\signal\__init__.py", line 309, in <module>
from . import _sigtools, windows
File "C:\Users\iirof\anaconda3\envs\rf\lib\site-packages\scipy\signal\windows\__init__.py", line 41, in <module>
from ._windows import *
File "C:\Users\iirof\anaconda3\envs\rf\lib\site-packages\scipy\signal\windows\_windows.py", line 7, in <module>
from scipy import linalg, special, fft as sp_fft
File "C:\Users\iirof\anaconda3\envs\rf\lib\site-packages\scipy\__init__.py", line 233, in __getattr__
return _importlib.import_module(f'scipy.{name}')
File "C:\Users\iirof\anaconda3\envs\rf\lib\importlib\__init__.py", line 127, in import_module
return _bootstrap._gcd_import(name[level:], package, level)
File "C:\Users\iirof\anaconda3\envs\rf\lib\site-packages\scipy\linalg\__init__.py", line 197, in <module>
from ._misc import *
File "C:\Users\iirof\anaconda3\envs\rf\lib\site-packages\scipy\linalg\_misc.py", line 3, in <module>
from .blas import get_blas_funcs
File "C:\Users\iirof\anaconda3\envs\rf\lib\site-packages\scipy\linalg\blas.py", line 213, in <module>
from scipy.linalg import _fblas
ImportError: DLL load failed while importing _fblas: %1 не является приложением Win32.
Tried to install different versions of python, but nothing new.
Im getting this error when importing this command on python
from tf_agents.agents.categorical_dqn import categorical_dqn_agent
Traceback (most recent call last):
File "<pyshell#19>", line 1, in <module>
from tf_agents.agents.categorical_dqn import categorical_dqn_agent
File "C:\Users\kasun\AppData\Local\Programs\Python\Python310\lib\site-packages\tf_agents\agents\__init__.py", line 17, in <module>
from tf_agents.agents import tf_agent
File "C:\Users\kasun\AppData\Local\Programs\Python\Python310\lib\site-packages\tf_agents\agents\tf_agent.py", line 26, in <module>
from tf_agents.specs import tensor_spec
File "C:\Users\kasun\AppData\Local\Programs\Python\Python310\lib\site-packages\tf_agents\specs\__init__.py", line 20, in <module>
from tf_agents.specs.distribution_spec import DistributionSpec
File "C:\Users\kasun\AppData\Local\Programs\Python\Python310\lib\site-packages\tf_agents\specs\distribution_spec.py", line 22, in <module>
import tensorflow_probability as tfp
File "C:\Users\kasun\AppData\Local\Programs\Python\Python310\lib\site-packages\tensorflow_probability\__init__.py", line 23, in <module>
from tensorflow_probability.python import * # pylint: disable=wildcard-import
File "C:\Users\kasun\AppData\Local\Programs\Python\Python310\lib\site-packages\tensorflow_probability\python\__init__.py", line 138, in <module>
dir(globals()[pkg_name]) # Forces loading the package from its lazy loader.
File "C:\Users\kasun\AppData\Local\Programs\Python\Python310\lib\site-packages\tensorflow_probability\python\internal\lazy_loader.py", line 57, in __dir__
module = self._load()
File "C:\Users\kasun\AppData\Local\Programs\Python\Python310\lib\site-packages\tensorflow_probability\python\internal\lazy_loader.py", line 40, in _load
module = importlib.import_module(self.__name__)
File "C:\Users\kasun\AppData\Local\Programs\Python\Python310\lib\importlib\__init__.py", line 126, in import_module
return _bootstrap._gcd_import(name[level:], package, level)
File "C:\Users\kasun\AppData\Local\Programs\Python\Python310\lib\site-packages\tensorflow_probability\python\experimental\__init__.py", line 31, in <module>
from tensorflow_probability.python.experimental import bijectors
File "C:\Users\kasun\AppData\Local\Programs\Python\Python310\lib\site-packages\tensorflow_probability\python\experimental\bijectors\__init__.py", line 17, in <module>
from tensorflow_probability.python.bijectors.ldj_ratio import forward_log_det_jacobian_ratio
File "C:\Users\kasun\AppData\Local\Programs\Python\Python310\lib\site-packages\tensorflow_probability\python\bijectors\__init__.py", line 19, in <module>
from tensorflow_probability.python.bijectors.absolute_value import AbsoluteValue
File "C:\Users\kasun\AppData\Local\Programs\Python\Python310\lib\site-packages\tensorflow_probability\python\bijectors\absolute_value.py", line 19, in <module>
from tensorflow_probability.python.bijectors import bijector
File "C:\Users\kasun\AppData\Local\Programs\Python\Python310\lib\site-packages\tensorflow_probability\python\bijectors\bijector.py", line 26, in <module>
from tensorflow_probability.python.internal import batch_shape_lib
File "C:\Users\kasun\AppData\Local\Programs\Python\Python310\lib\site-packages\tensorflow_probability\python\internal\batch_shape_lib.py", line 23, in <module>
from tensorflow_probability.python.internal import prefer_static as ps
File "C:\Users\kasun\AppData\Local\Programs\Python\Python310\lib\site-packages\tensorflow_probability\python\internal\prefer_static.py", line 26, in <module>
from tensorflow_probability.python.internal.backend import numpy as nptf
File "C:\Users\kasun\AppData\Local\Programs\Python\Python310\lib\site-packages\tensorflow_probability\python\internal\backend\numpy\__init__.py", line 18, in <module>
from tensorflow_probability.python.internal.backend.numpy import bitwise
File "C:\Users\kasun\AppData\Local\Programs\Python\Python310\lib\site-packages\tensorflow_probability\python\internal\backend\numpy\bitwise.py", line 19, in <module>
from tensorflow_probability.python.internal.backend.numpy import _utils as utils
File "C:\Users\kasun\AppData\Local\Programs\Python\Python310\lib\site-packages\tensorflow_probability\python\internal\backend\numpy\_utils.py", line 22, in <module>
from tensorflow_probability.python.internal.backend.numpy import nest
File "C:\Users\kasun\AppData\Local\Programs\Python\Python310\lib\site-packages\tensorflow_probability\python\internal\backend\numpy\nest.py", line 68, in <module>
assert_same_structure = dm_tree.assert_same_structure
AttributeError: module 'tree' has no attribute 'assert_same_structure'
I tried this:
pip3 install dm-tree
but it also didnt work
Try:
pip install --upgrade dm-tree
I am running tensorflow within a microservice built using Klein/Twisted. I recently upgraded to a new version of scikit-learn (20.0), and am getting an error ValueError: bad value(s) in fds_to_keep. When I revert the version of scikit-learn to 19.2 the error is eliminated. I looked at the changelog for scikit-learn, and in version 20.0 they started using joblib for parallel computation. Below I am including a stack trace for the error. I am using Twisted version 19.7.
Any insights or advice on how to debug further is much appreciated.
I have tried newer versions of scikit-learn e.g.21.3, but the error remains.
File "/home/ppiela/anaconda3/envs/visual_extraction_validation/lib/python3.6/site-packages/calamari_ocr/ocr/predictor.py", line 106, in __init__
backend = create_backend_from_proto(self.network_params, restore=self.checkpoint, processes=processes)
File "/home/ppiela/anaconda3/envs/visual_extraction_validation/lib/python3.6/site-packages/calamari_ocr/ocr/backends/factory.py", line 28, in create_backend_from_proto
from calamari_ocr.ocr.backends.tensorflow_backend.tensorflow_backend import TensorflowBackend
File "/home/ppiela/anaconda3/envs/visual_extraction_validation/lib/python3.6/site-packages/calamari_ocr/ocr/backends/tensorflow_backend/tensorflow_backend.py", line 4, in <module>
from calamari_ocr.ocr.backends.tensorflow_backend.tensorflow_model import TensorflowModel
File "/home/ppiela/anaconda3/envs/visual_extraction_validation/lib/python3.6/site-packages/calamari_ocr/ocr/backends/tensorflow_backend/tensorflow_model.py", line 3, in <module>
import tensorflow.contrib.cudnn_rnn as cudnn_rnn
File "/home/ppiela/anaconda3/envs/visual_extraction_validation/lib/python3.6/site-packages/tensorflow/contrib/__init__.py", line 37, in <module>
from tensorflow.contrib import cudnn_rnn
File "/home/ppiela/anaconda3/envs/visual_extraction_validation/lib/python3.6/site-packages/tensorflow/contrib/cudnn_rnn/__init__.py", line 38, in <module>
from tensorflow.contrib.cudnn_rnn.python.layers import *
File "/home/ppiela/anaconda3/envs/visual_extraction_validation/lib/python3.6/site-packages/tensorflow/contrib/cudnn_rnn/python/layers/__init__.py", line 23, in <module>
from tensorflow.contrib.cudnn_rnn.python.layers.cudnn_rnn import *
File "/home/ppiela/anaconda3/envs/visual_extraction_validation/lib/python3.6/site-packages/tensorflow/contrib/cudnn_rnn/python/layers/cudnn_rnn.py", line 20, in <module>
from tensorflow.contrib.cudnn_rnn.python.ops import cudnn_rnn_ops
File "/home/ppiela/anaconda3/envs/visual_extraction_validation/lib/python3.6/site-packages/tensorflow/contrib/cudnn_rnn/python/ops/cudnn_rnn_ops.py", line 22, in <module>
from tensorflow.contrib.rnn.python.ops import lstm_ops
File "/home/ppiela/anaconda3/envs/visual_extraction_validation/lib/python3.6/site-packages/tensorflow/contrib/rnn/__init__.py", line 93, in <module>
from tensorflow.contrib.rnn.python.ops.rnn_cell import *
File "/home/ppiela/anaconda3/envs/visual_extraction_validation/lib/python3.6/site-packages/tensorflow/contrib/rnn/python/ops/rnn_cell.py", line 24, in <module>
from tensorflow.contrib.layers.python.layers import layers
File "/home/ppiela/anaconda3/envs/visual_extraction_validation/lib/python3.6/site-packages/tensorflow/contrib/layers/__init__.py", line 116, in <module>
from tensorflow.contrib.layers.python.layers import *
File "/home/ppiela/anaconda3/envs/visual_extraction_validation/lib/python3.6/site-packages/tensorflow/contrib/layers/python/layers/__init__.py", line 33, in <module>
from tensorflow.contrib.layers.python.layers.target_column import *
File "/home/ppiela/anaconda3/envs/visual_extraction_validation/lib/python3.6/site-packages/tensorflow/contrib/layers/python/layers/target_column.py", line 24, in <module>
from tensorflow.contrib.losses.python.losses import loss_ops
File "/home/ppiela/anaconda3/envs/visual_extraction_validation/lib/python3.6/site-packages/tensorflow/contrib/losses/__init__.py", line 25, in <module>
from tensorflow.contrib.losses.python import metric_learning
File "/home/ppiela/anaconda3/envs/visual_extraction_validation/lib/python3.6/site-packages/tensorflow/contrib/losses/python/metric_learning/__init__.py", line 25, in <module>
from tensorflow.contrib.losses.python.metric_learning.metric_loss_ops import *
File "/home/ppiela/anaconda3/envs/visual_extraction_validation/lib/python3.6/site-packages/tensorflow/contrib/losses/python/metric_learning/metric_loss_ops.py", line 34, in <module>
from sklearn import metrics
File "/home/ppiela/anaconda3/envs/visual_extraction_validation/lib/python3.6/site-packages/sklearn/__init__.py", line 76, in <module>
from .base import clone
File "/home/ppiela/anaconda3/envs/visual_extraction_validation/lib/python3.6/site-packages/sklearn/base.py", line 16, in <module>
from .utils import _IS_32BIT
File "/home/ppiela/anaconda3/envs/visual_extraction_validation/lib/python3.6/site-packages/sklearn/utils/__init__.py", line 17, in <module>
from . import _joblib
File "/home/ppiela/anaconda3/envs/visual_extraction_validation/lib/python3.6/site-packages/sklearn/utils/_joblib.py", line 8, in <module>
import joblib
File "/home/ppiela/anaconda3/envs/visual_extraction_validation/lib/python3.6/site-packages/joblib/__init__.py", line 119, in <module>
from .parallel import Parallel
File "/home/ppiela/anaconda3/envs/visual_extraction_validation/lib/python3.6/site-packages/joblib/parallel.py", line 22, in <module>
from ._multiprocessing_helpers import mp
File "/home/ppiela/anaconda3/envs/visual_extraction_validation/lib/python3.6/site-packages/joblib/_multiprocessing_helpers.py", line 34, in <module>
_sem = Semaphore()
File "/home/ppiela/anaconda3/envs/visual_extraction_validation/lib/python3.6/multiprocessing/context.py", line 82, in Semaphore
return Semaphore(value, ctx=self.get_context())
File "/home/ppiela/anaconda3/envs/visual_extraction_validation/lib/python3.6/multiprocessing/synchronize.py", line 127, in __init__
SemLock.__init__(self, SEMAPHORE, value, SEM_VALUE_MAX, ctx=ctx)
File "/home/ppiela/anaconda3/envs/visual_extraction_validation/lib/python3.6/multiprocessing/synchronize.py", line 81, in __init__
register(self._semlock.name)
File "/home/ppiela/anaconda3/envs/visual_extraction_validation/lib/python3.6/multiprocessing/semaphore_tracker.py", line 83, in register
self._send('REGISTER', name)
File "/home/ppiela/anaconda3/envs/visual_extraction_validation/lib/python3.6/multiprocessing/semaphore_tracker.py", line 90, in _send
self.ensure_running()
File "/home/ppiela/anaconda3/envs/visual_extraction_validation/lib/python3.6/multiprocessing/semaphore_tracker.py", line 71, in ensure_running
pid = util.spawnv_passfds(exe, args, fds_to_pass)
File "/home/ppiela/anaconda3/envs/visual_extraction_validation/lib/python3.6/multiprocessing/util.py", line 403, in spawnv_passfds
False, False, None)
ValueError: bad value(s) in fds_to_keep
I tried to run this line import pylab as pl
File "lab.py", line 9, in <module>
import pylab as pl
File "/usr/lib/python2.7/site-packages/matplotlib-1.4.3-py2.7-cygwin-1.7.35-x86_64.egg/pylab.py", line 1, in <module>
from matplotlib.pylab import *
File "/usr/lib/python2.7/site-packages/matplotlib-1.4.3-py2.7-cygwin-1.7.35-x86_64.egg/matplotlib/pylab.py", line 231, in <module>
import matplotlib.finance
File "/usr/lib/python2.7/site-packages/matplotlib-1.4.3-py2.7-cygwin-1.7.35-x86_64.egg/matplotlib/finance.py", line 36, in <module>
from matplotlib.dates import date2num
File "/usr/lib/python2.7/site-packages/matplotlib-1.4.3-py2.7-cygwin-1.7.35-x86_64.egg/matplotlib/dates.py", line 137, in <module>
import matplotlib.ticker as ticker
File "/usr/lib/python2.7/site-packages/matplotlib-1.4.3-py2.7-cygwin-1.7.35-x86_64.egg/matplotlib/ticker.py", line 158, in <module>
from matplotlib import transforms as mtransforms
File "/usr/lib/python2.7/site-packages/matplotlib-1.4.3-py2.7-cygwin-1.7.35-x86_64.egg/matplotlib/transforms.py", line 39, in <module>
from matplotlib._path import (affine_transform, count_bboxes_overlapping_bbox,
File "/usr/lib/python2.7/site-packages/matplotlib-1.4.3-py2.7-cygwin-1.7.35-x86_64.egg/matplotlib/_path.py", line 7, in <module>
__bootstrap__()
File "/usr/lib/python2.7/site-packages/matplotlib-1.4.3-py2.7-cygwin-1.7.35-x86_64.egg/matplotlib/_path.py", line 6, in __bootstrap__
imp.load_dynamic(__name__,__file__)
ImportError: Permission denied
Is it due to some config which has to be done after installation of matplotlib?
I understand that there have been several questions asked on this topic, however, I didn't find them able to solve my problem.
I installed matplotlib on the maching under /python-path/site-packages, both library and python are 64bits,
so I could import matplotlib no problem, but when I tried to import matplotlib.pylab or pylab, it gives me the following error
Traceback (most recent call last):
File "shownet.py", line 40, in <module>
import matplotlib.pylab
File "/usr/lib64/python2.6/site-packages/matplotlib/pylab.py", line 247, in <module>
from matplotlib.pyplot import *
File "/usr/lib64/python2.6/site-packages/matplotlib/pyplot.py", line 78, in <module>
new_figure_manager, draw_if_interactive, show = pylab_setup()
File "/usr/lib64/python2.6/site-packages/matplotlib/backends/__init__.py", line 25, in pylab_setup
globals(),locals(),[backend_name])
File "/usr/lib64/python2.6/site-packages/matplotlib/backends/backend_gtkagg.py", line 10, in <module>
from matplotlib.backends.backend_gtk import gtk, FigureManagerGTK, FigureCanvasGTK,\
File "/usr/lib64/python2.6/site-packages/matplotlib/backends/backend_gtk.py", line 8, in <module>
import gtk; gdk = gtk.gdk
File "/usr/lib64/python2.6/site-packages/gtk-2.0/gtk/__init__.py", line 64, in <module>
_init()
File "/usr/lib64/python2.6/site-packages/gtk-2.0/gtk/__init__.py", line 52, in _init
_gtk.init_check()
Would anyone know why this is so?
Also this is on linux, and I built it using setup.py