How to enable SQL on SchemaRDD via the JDBC interface? (is it even possible ?) - hive

Question

UPDATING the problem statement
We are using spark 1.2.0 (Hadoop 2.4). We have defined SchemaRDDs using data files in HDFS and would like to enable querying these as tables via HiveServer2. We are encountering runtime exceptions while trying to saveAsTable and would like guidance on how to proceed.
Source code:
package foo.bar
import org.apache.spark.SparkContext
import org.apache.spark.SparkContext._
import org.apache.spark.SparkConf
import org.apache.spark.sql._
import org.apache.spark._
import org.apache.spark.sql.hive._
object HiveDemo {
def main(args: Array[String]) {
val conf = new SparkConf().setAppName("Demo")
val sc = new SparkContext(conf)
// sc is an existing SparkContext.
val hiveContext = new org.apache.spark.sql.hive.HiveContext(sc)
// Create an RDD
val zipRDD = sc.textFile("/model-inputs/all_zip_state.csv")
// The schema is encoded in a string
val schemaString = "ODSMEMBERID,ZIPCODE,STATE,TEST_SUPPLIERID,ratio_death_readm_low,ratio_death_readm_high,regions"
// Generate the schema based on the string of schema
val schema =
StructType(
schemaString.split(",").map(fieldName => StructField(fieldName, StringType, true)))
// Convert records of the RDD (zip) to Rows.
val rowRDD = zipRDD.map(_.split(",")).map(p => Row(p(0), p(1), p(2), p(3), p(4), p(5), ""))
// Apply the schema to the RDD.
val zipSchemaRDD = hiveContext.applySchema(rowRDD, schema)
// HiveContext's save as Table
zipSchemaRDD.saveAsTable("allzipstable")
}
}
spark-submit Command:
./bin/spark-submit --class foo.bar.HiveDemo --master yarn-cluster --jars /usr/lib/hive/lib/hive-metastore.jar,/usr/lib/spark-1.2.0-bin-hadoop2.4/lib/datanucleus-api-jdo-3.2.6.jar,/usr/lib/spark-1.2.0-bin-hadoop2.4/lib/datanucleus-core-3.2.10.jar,/usr/lib/spark-1.2.0-bin-hadoop2.4/lib/datanucleus-rdbms-3.2.9.jar --num-executors 3 --driver-memory 4g --executor-memory 2g --executor-cores 1 lib/datapipe_2.10-1.0.jar 10
Exception at runtime on Node:
15/01/29 22:35:50 INFO yarn.ApplicationMaster: Final app status: FAILED, exitCode: 15, (reason: User class threw exception: Unresolved plan found, tree:
'CreateTableAsSelect None, allzipstable, false, None
LogicalRDD [ODSMEMBERID#0,ZIPCODE#1,STATE#2,TEST_SUPPLIERID#3,ratio_death_readm_low#4,ratio_death_readm_high#5,regions#6], MappedRDD[3] at map at HiveDemo.scala:30
)
Exception in thread "Driver" org.apache.spark.sql.catalyst.errors.package$TreeNodeException: Unresolved plan found, tree:
'CreateTableAsSelect None, allzipstable, false, None
LogicalRDD [ODSMEMBERID#0,ZIPCODE#1,STATE#2,TEST_SUPPLIERID#3,ratio_death_readm_low#4,ratio_death_readm_high#5,regions#6], MappedRDD[3] at map at HiveDemo.scala:30
at org.apache.spark.sql.catalyst.analysis.Analyzer$CheckResolution$$anonfun$1.applyOrElse(Analyzer.scala:83)
at org.apache.spark.sql.catalyst.analysis.Analyzer$CheckResolution$$anonfun$1.applyOrElse(Analyzer.scala:78)
at org.apache.spark.sql.catalyst.trees.TreeNode.transformDown(TreeNode.scala:144)
at org.apache.spark.sql.catalyst.trees.TreeNode.transform(TreeNode.scala:135)
at org.apache.spark.sql.catalyst.analysis.Analyzer$CheckResolution$.apply(Analyzer.scala:78)
at org.apache.spark.sql.catalyst.analysis.Analyzer$CheckResolution$.apply(Analyzer.scala:76)
at org.apache.spark.sql.catalyst.rules.RuleExecutor$$anonfun$apply$1$$anonfun$apply$2.apply(RuleExecutor.scala:61)
at org.apache.spark.sql.catalyst.rules.RuleExecutor$$anonfun$apply$1$$anonfun$apply$2.apply(RuleExecutor.scala:59)
at scala.collection.IndexedSeqOptimized$class.foldl(IndexedSeqOptimized.scala:51)
at scala.collection.IndexedSeqOptimized$class.foldLeft(IndexedSeqOptimized.scala:60)
at scala.collection.mutable.WrappedArray.foldLeft(WrappedArray.scala:34)
at org.apache.spark.sql.catalyst.rules.RuleExecutor$$anonfun$apply$1.apply(RuleExecutor.scala:59)
at org.apache.spark.sql.catalyst.rules.RuleExecutor$$anonfun$apply$1.apply(RuleExecutor.scala:51)
at scala.collection.immutable.List.foreach(List.scala:318)
at org.apache.spark.sql.catalyst.rules.RuleExecutor.apply(RuleExecutor.scala:51)
at org.apache.spark.sql.SQLContext$QueryExecution.analyzed$lzycompute(SQLContext.scala:411)
at org.apache.spark.sql.SQLContext$QueryExecution.analyzed(SQLContext.scala:411)
at org.apache.spark.sql.SQLContext$QueryExecution.withCachedData$lzycompute(SQLContext.scala:412)
at org.apache.spark.sql.SQLContext$QueryExecution.withCachedData(SQLContext.scala:412)
at org.apache.spark.sql.SQLContext$QueryExecution.optimizedPlan$lzycompute(SQLContext.scala:413)
at org.apache.spark.sql.SQLContext$QueryExecution.optimizedPlan(SQLContext.scala:413)
at org.apache.spark.sql.SQLContext$QueryExecution.sparkPlan$lzycompute(SQLContext.scala:418)
at org.apache.spark.sql.SQLContext$QueryExecution.sparkPlan(SQLContext.scala:416)
at org.apache.spark.sql.SQLContext$QueryExecution.executedPlan$lzycompute(SQLContext.scala:422)
at org.apache.spark.sql.SQLContext$QueryExecution.executedPlan(SQLContext.scala:422)
at org.apache.spark.sql.SQLContext$QueryExecution.toRdd$lzycompute(SQLContext.scala:425)
at org.apache.spark.sql.SQLContext$QueryExecution.toRdd(SQLContext.scala:425)
at org.apache.spark.sql.SchemaRDDLike$class.saveAsTable(SchemaRDDLike.scala:126)
at org.apache.spark.sql.SchemaRDD.saveAsTable(SchemaRDD.scala:108)
at com.healthagen.datapipe.ahm.HiveDemo$.main(HiveDemo.scala:36)
at com.healthagen.datapipe.ahm.HiveDemo.main(HiveDemo.scala)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:606)
at org.apache.spark.deploy.yarn.ApplicationMaster$$anon$2.run(ApplicationMaster.scala:427)
15/01/29 22:35:50 INFO yarn.ApplicationMaster: Invoking sc stop from shutdown hook
Another attempt:
package foo.bar
import org.apache.spark.{ SparkConf, SparkContext }
import org.apache.spark.sql._
case class AllZips(
ODSMEMBERID: String,
ZIPCODE: String,
STATE: String,
TEST_SUPPLIERID: String,
ratio_death_readm_low: String,
ratio_death_readm_high: String,
regions: String)
object HiveDemo {
def main(args: Array[String]) {
val conf = new SparkConf().setAppName("HiveDemo")
val sc = new SparkContext(conf)
val hiveContext = new org.apache.spark.sql.hive.HiveContext(sc)
import hiveContext._
val allZips = sc.textFile("/model-inputs/all_zip_state.csv").map(_.split(",")).map(p => AllZips(p(0), p(1), p(2), p(3), p(4), p(5), ""))
val allZipsSchemaRDD = createSchemaRDD(allZips)
allZipsSchemaRDD.saveAsTable("allzipstable")
}
}
Exception on node:
15/01/30 00:28:19 INFO yarn.ApplicationMaster: Final app status: FAILED, exitCode: 15, (reason: User class threw exception: Unresolved plan found, tree:
'CreateTableAsSelect None, allzipstable, false, None
LogicalRDD [ODSMEMBERID#0,ZIPCODE#1,STATE#2,TEST_SUPPLIERID#3,ratio_death_readm_low#4,ratio_death_readm_high#5,regions#6], MapPartitionsRDD[4] at mapPartitions at ExistingRDD.scala:36
)
Exception in thread "Driver" org.apache.spark.sql.catalyst.errors.package$TreeNodeException: Unresolved plan found, tree:
'CreateTableAsSelect None, allzipstable, false, None
LogicalRDD [ODSMEMBERID#0,ZIPCODE#1,STATE#2,TEST_SUPPLIERID#3,ratio_death_readm_low#4,ratio_death_readm_high#5,regions#6], MapPartitionsRDD[4] at mapPartitions at ExistingRDD.scala:36
at org.apache.spark.sql.catalyst.analysis.Analyzer$CheckResolution$$anonfun$1.applyOrElse(Analyzer.scala:83)
at org.apache.spark.sql.catalyst.analysis.Analyzer$CheckResolution$$anonfun$1.applyOrElse(Analyzer.scala:78)
at org.apache.spark.sql.catalyst.trees.TreeNode.transformDown(TreeNode.scala:144)
at org.apache.spark.sql.catalyst.trees.TreeNode.transform(TreeNode.scala:135)
at org.apache.spark.sql.catalyst.analysis.Analyzer$CheckResolution$.apply(Analyzer.scala:78)
at org.apache.spark.sql.catalyst.analysis.Analyzer$CheckResolution$.apply(Analyzer.scala:76)
at org.apache.spark.sql.catalyst.rules.RuleExecutor$$anonfun$apply$1$$anonfun$apply$2.apply(RuleExecutor.scala:61)
at org.apache.spark.sql.catalyst.rules.RuleExecutor$$anonfun$apply$1$$anonfun$apply$2.apply(RuleExecutor.scala:59)
at scala.collection.IndexedSeqOptimized$class.foldl(IndexedSeqOptimized.scala:51)
at scala.collection.IndexedSeqOptimized$class.foldLeft(IndexedSeqOptimized.scala:60)
at scala.collection.mutable.WrappedArray.foldLeft(WrappedArray.scala:34)
at org.apache.spark.sql.catalyst.rules.RuleExecutor$$anonfun$apply$1.apply(RuleExecutor.scala:59)
at org.apache.spark.sql.catalyst.rules.RuleExecutor$$anonfun$apply$1.apply(RuleExecutor.scala:51)
at scala.collection.immutable.List.foreach(List.scala:318)
at org.apache.spark.sql.catalyst.rules.RuleExecutor.apply(RuleExecutor.scala:51)
at org.apache.spark.sql.SQLContext$QueryExecution.analyzed$lzycompute(SQLContext.scala:411)
at org.apache.spark.sql.SQLContext$QueryExecution.analyzed(SQLContext.scala:411)
at org.apache.spark.sql.SQLContext$QueryExecution.withCachedData$lzycompute(SQLContext.scala:412)
at org.apache.spark.sql.SQLContext$QueryExecution.withCachedData(SQLContext.scala:412)
at org.apache.spark.sql.SQLContext$QueryExecution.optimizedPlan$lzycompute(SQLContext.scala:413)
at org.apache.spark.sql.SQLContext$QueryExecution.optimizedPlan(SQLContext.scala:413)
at org.apache.spark.sql.SQLContext$QueryExecution.sparkPlan$lzycompute(SQLContext.scala:418)
at org.apache.spark.sql.SQLContext$QueryExecution.sparkPlan(SQLContext.scala:416)
at org.apache.spark.sql.SQLContext$QueryExecution.executedPlan$lzycompute(SQLContext.scala:422)
at org.apache.spark.sql.SQLContext$QueryExecution.executedPlan(SQLContext.scala:422)
at org.apache.spark.sql.SQLContext$QueryExecution.toRdd$lzycompute(SQLContext.scala:425)
at org.apache.spark.sql.SQLContext$QueryExecution.toRdd(SQLContext.scala:425)
at org.apache.spark.sql.SchemaRDDLike$class.saveAsTable(SchemaRDDLike.scala:126)
at org.apache.spark.sql.SchemaRDD.saveAsTable(SchemaRDD.scala:108)
at com.healthagen.datapipe.ahm.HiveDemo$.main(HiveDemo.scala:22)
at com.healthagen.datapipe.ahm.HiveDemo.main(HiveDemo.scala)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:606)
at org.apache.spark.deploy.yarn.ApplicationMaster$$anon$2.run(ApplicationMaster.scala:427)
15/01/30 00:28:19 INFO yarn.ApplicationMaster: Invoking sc stop from shutdown hook

Answer 1

You need to use a HiveContext
Here are the java/scala docs:
* Note that this currently only works with SchemaRDDs that are created from a HiveContext as
* there is no notion of a persisted catalog in a standard SQL context.
#Experimental
def saveAsTable(tableName: String): Unit =
sqlContext.executePlan(CreateTableAsSelect(None, tableName, logicalPlan, false)).toRdd
So in your code change it to:
val sc = new HiveContext(conf)
Actually you should rename it to
val sqlc = new HiveContext(conf)
FYI: more info about registering tables (in SQLContext): note the tables are transient if done this way:
/**
* Temporary tables exist only
* during the lifetime of this instance of SQLContext.
*
* #group userf
*/
def registerRDDAsTable(rdd: SchemaRDD, tableName: String): Unit = {
catalog.registerTable(Seq(tableName), rdd.queryExecution.logical)
}
UPDATE Your new stacktrace includes the following phrase:
Unresolved plan found, tree:
That typically means you have a column that does not match the underlying table. I will look further to see if am able to isolate - but in the meantime you might also consider from that perspective.

Answer 2

createSchemaRDD code snippet from above works fine on spark 1.2.1
There was a CTAS defect in 1.2.0