Using trained webcam on trained roboflow model - webcam

I'm trying to run a trained roboflow model using my webcam on visual code studio. The webcam does load up alongside the popup, but it's just a tiny rectangle in the corner and you can't see anything else. If i change "image", image to "image",1 or something else in the cv2.imshow line, the webcam lights up for a second and returns the error code:
cv2.error: OpenCV(4.5.4) D:\a\opencv-python\opencv-python\opencv\modules\imgproc\src\color.cpp:182: error: (-215:Assertion failed) !_src.empty() in function 'cv::cvtColor'
Here is my code as obtained from a github roboflow has:
# load config
import json
with open('roboflow_config.json') as f:
config = json.load(f)
ROBOFLOW_API_KEY = "********"
ROBOFLOW_MODEL = "penguins-ojf2k"
ROBOFLOW_SIZE = "416"
FRAMERATE = config["FRAMERATE"]
BUFFER = config["BUFFER"]
import asyncio
import cv2
import base64
import numpy as np
import httpx
import time
# Construct the Roboflow Infer URL
# (if running locally replace https://detect.roboflow.com/ with eg http://127.0.0.1:9001/)
upload_url = "".join([
"https://detect.roboflow.com/",
ROBOFLOW_MODEL,
"?api_key=",
ROBOFLOW_API_KEY,
"&format=image", # Change to json if you want the prediction boxes, not the visualization
"&stroke=5"
])
# Get webcam interface via opencv-python
video = cv2.VideoCapture(0,cv2.CAP_DSHOW)
# Infer via the Roboflow Infer API and return the result
# Takes an httpx.AsyncClient as a parameter
async def infer(requests):
# Get the current image from the webcam
ret, img = video.read()
# Resize (while maintaining the aspect ratio) to improve speed and save bandwidth
height, width, channels = img.shape
scale = min(height, width)
img = cv2.resize(img, (2000, 1500))
# Encode image to base64 string
retval, buffer = cv2.imencode('.jpg', img)
img_str = base64.b64encode(buffer)
# Get prediction from Roboflow Infer API
resp = await requests.post(upload_url, data=img_str, headers={
"Content-Type": "application/x-www-form-urlencoded"
})
# Parse result image
image = np.asarray(bytearray(resp.content), dtype="uint8")
image = cv2.imdecode(image, cv2.IMREAD_COLOR)
return image
# Main loop; infers at FRAMERATE frames per second until you press "q"
async def main():
# Initialize
last_frame = time.time()
# Initialize a buffer of images
futures = []
async with httpx.AsyncClient() as requests:
while True:
# On "q" keypress, exit
if(cv2.waitKey(1) == ord('q')):
break
# Throttle to FRAMERATE fps and print actual frames per second achieved
elapsed = time.time() - last_frame
await asyncio.sleep(max(0, 1/FRAMERATE - elapsed))
print((1/(time.time()-last_frame)), " fps")
last_frame = time.time()
# Enqueue the inference request and safe it to our buffer
task = asyncio.create_task(infer(requests))
futures.append(task)
# Wait until our buffer is big enough before we start displaying results
if len(futures) < BUFFER * FRAMERATE:
continue
# Remove the first image from our buffer
# wait for it to finish loading (if necessary)
image = await futures.pop(0)
# And display the inference results
img = cv2.imread('img.jpg')
cv2.imshow('image', image)
# Run our main loop
asyncio.set_event_loop_policy(asyncio.WindowsSelectorEventLoopPolicy())
asyncio.run(main())
# Release resources when finished
video.release()
cv2.destroyAllWindows()

It looks like you're missing your model's version number so the API is probably returning a 404 error which OpenCV is trying to read as an image.
I found your project on Roboflow Universe based on the ROBOFLOW_MODEL in your code; it looks like you're looking for version 3.
So try changing the line
ROBOFLOW_MODEL = "penguins-ojf2k"
to
ROBOFLOW_MODEL = "penguins-ojf2k/3"
It also looks like your model was trained at 640x640 (not 416x416) so you should change ROBOFLOW_SIZE to 640 as well for best results.

Related

How to access a SPECIFIC label in Tensorflow Lite object?

I got this code down here and I don't know how to access the "category_name" attribute. If it detects a person, I want it to say "Hello" in the command prompt.
I tried a LOT of different syntaxes and it didn't work. Down below is an image of how the "list" object looks when I do the
print(detection_result.detections)
. What we want is the "category_name". You can see in the code I tried an "IF" that didn't help too much, since it's detecting 3 models simultaneously, so I guess the array has 3 elements, which themselves have multiple elements.
Is there a beginner-friendly answer to this?
Note: I got a Raspberry Pi 4 B
image
# Copyright 2021 The TensorFlow Authors. All Rights Reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""Main script to run the object detection routine."""
import argparse
import sys
import time
import cv2
from tflite_support.task import core
from tflite_support.task import processor
from tflite_support.task import vision
import utils
def run(model: str, camera_id: int, width: int, height: int, num_threads: int,
enable_edgetpu: bool) -> None:
"""Continuously run inference on images acquired from the camera.
Args:
model: Name of the TFLite object detection model.
camera_id: The camera id to be passed to OpenCV.
width: The width of the frame captured from the camera.
height: The height of the frame captured from the camera.
num_threads: The number of CPU threads to run the model.
enable_edgetpu: True/False whether the model is a EdgeTPU model.
"""
# Variables to calculate FPS
counter, fps = 0, 0
start_time = time.time()
# Start capturing video input from the camera
cap = cv2.VideoCapture(camera_id)
cap.set(cv2.CAP_PROP_FRAME_WIDTH, width)
cap.set(cv2.CAP_PROP_FRAME_HEIGHT, height)
# Visualization parameters
row_size = 20 # pixels
left_margin = 24 # pixels
text_color = (0, 0, 255) # red
font_size = 1
font_thickness = 1
fps_avg_frame_count = 10
# Initialize the object detection model
base_options = core.BaseOptions(
file_name=model, use_coral=enable_edgetpu, num_threads=num_threads)
detection_options = processor.DetectionOptions(
max_results=3, score_threshold=0.3)
options = vision.ObjectDetectorOptions(
base_options=base_options, detection_options=detection_options)
detector = vision.ObjectDetector.create_from_options(options)
# Continuously capture images from the camera and run inference
while cap.isOpened():
success, image = cap.read()
if not success:
sys.exit(
'ERROR: Unable to read from webcam. Please verify your webcam settings.'
)
counter += 1
image = cv2.flip(image, 1)
# Convert the image from BGR to RGB as required by the TFLite model.
rgb_image = cv2.cvtColor(image, cv2.COLOR_BGR2RGB)
# Create a TensorImage object from the RGB image.
input_tensor = vision.TensorImage.create_from_array(rgb_image)
# Run object detection estimation using the model.
detection_result = detector.detect(input_tensor)
print(detection_result)
#print(detection_result.detections.category_name[0])
#if detection_result[0].detections.categories.category_name)=='person':
#if getattr(detection_result, 'label') =='person':
# print("YES")
#print(detection_result)
#print(...)
#print(detection_result(detections=[]))
# Draw keypoints and edges on input image
image = utils.visualize(image, detection_result)
# Calculate the FPS
if counter % fps_avg_frame_count == 0:
end_time = time.time()
fps = fps_avg_frame_count / (end_time - start_time)
start_time = time.time()
# Show the FPS
fps_text = 'FPS = {:.1f}'.format(fps)
text_location = (left_margin, row_size)
cv2.putText(image, fps_text, text_location, cv2.FONT_HERSHEY_PLAIN,
font_size, text_color, font_thickness)
# Stop the program if the ESC key is pressed.
if cv2.waitKey(1) == 27:
break
cv2.imshow('object_detector', image)
cap.release()
cv2.destroyAllWindows()
def main():
parser = argparse.ArgumentParser(
formatter_class=argparse.ArgumentDefaultsHelpFormatter)
parser.add_argument(
'--model',
help='Path of the object detection model.',
required=False,
default='efficientdet_lite0.tflite')
parser.add_argument(
'--cameraId', help='Id of camera.', required=False, type=int, default=0)
parser.add_argument(
'--frameWidth',
help='Width of frame to capture from camera.',
required=False,
type=int,
default=640)
parser.add_argument(
'--frameHeight',
help='Height of frame to capture from camera.',
required=False,
type=int,
default=480)
parser.add_argument(
'--numThreads',
help='Number of CPU threads to run the model.',
required=False,
type=int,
default=4)
parser.add_argument(
'--enableEdgeTPU',
help='Whether to run the model on EdgeTPU.',
action='store_true',
required=False,
default=False)
args = parser.parse_args()
run(args.model, int(args.cameraId), args.frameWidth, args.frameHeight,
int(args.numThreads), bool(args.enableEdgeTPU))
if _name_ == '_main_':
main()

ERROR: engine.cpp (370) - Cuda Error in ~ExecutionContext: 77

I do Int8 calibration using TensorRT.
Once calibration is completed and test the inference. I have error at stream.synchronize() in the following function.
No issue running on FP32 and FP16 engines. Only have error running at Int8 engine. What could be wrong?
def infer(engine, x, batch_size, context):
inputs = []
outputs = []
bindings = []
stream = cuda.Stream()
for binding in engine:
size = trt.volume(engine.get_binding_shape(binding)) * batch_size
dtype = trt.nptype(engine.get_binding_dtype(binding))
# Allocate host and device buffers
host_mem = cuda.pagelocked_empty(size, dtype)
device_mem = cuda.mem_alloc(host_mem.nbytes)
# Append the device buffer to device bindings.
bindings.append(int(device_mem))
# Append to the appropriate list.
if engine.binding_is_input(binding):
inputs.append(HostDeviceMem(host_mem, device_mem))
else:
outputs.append(HostDeviceMem(host_mem, device_mem))
#img = np.array(x).ravel()
im = np.array(x, dtype=np.float32, order='C')
im = im[:,:,::-1]
#im = im.transpose((2,0,1))
#np.copyto(inputs[0].host, x.flatten()) #1.0 - img / 255.0
np.copyto(inputs[0].host, im.flatten())
[cuda.memcpy_htod_async(inp.device, inp.host, stream) for inp in inputs]
context.execute_async(batch_size=batch_size, bindings=bindings, stream_handle=stream.handle)
# Transfer predictions back from the GPU.
[cuda.memcpy_dtoh_async(out.host, out.device, stream) for out in outputs]
# Synchronize the stream
stream.synchronize()
# Return only the host outputs.
The following code has no error. Only engine.max_batch_size and batch_size are different.
def allocate_buffers(engine):
inputs = []
outputs = []
bindings = []
stream = cuda.Stream()
for binding in engine:
size = trt.volume(engine.get_binding_shape(binding)) * engine.max_batch_size
dtype = trt.nptype(engine.get_binding_dtype(binding))
# Allocate host and device buffers
host_mem = cuda.pagelocked_empty(size, dtype)
device_mem = cuda.mem_alloc(host_mem.nbytes)
# Append the device buffer to device bindings.
bindings.append(int(device_mem))
# Append to the appropriate list.
if engine.binding_is_input(binding):
inputs.append(HostDeviceMem(host_mem, device_mem))
else:
outputs.append(HostDeviceMem(host_mem, device_mem))
return inputs, outputs, bindings, stream
# This function is generalized for multiple inputs/outputs.
# inputs and outputs are expected to be lists of HostDeviceMem objects.
def do_inference(context, bindings, inputs, outputs, stream, batch_size=1):
# Transfer input data to the GPU.
[cuda.memcpy_htod_async(inp.device, inp.host, stream) for inp in inputs]
# Run inference.
context.execute_async(batch_size=batch_size, bindings=bindings, stream_handle=stream.handle)
# Transfer predictions back from the GPU.
[cuda.memcpy_dtoh_async(out.host, out.device, stream) for out in outputs]
# Synchronize the stream
stream.synchronize()
# Return only the host outputs.
return [out.host for out in outputs]

In skimage, How to transform an image array to binary type?

I'm doing some deep learning CNN work using tensorflow, I wanna load image dataset and change its type to TFRecord as recommended. When I use PIL library, it work fine:
for img_name in os.listdir(class_path):
img_path = class_path + img_name
img = Image.open(img_path)
img = img.resize((250,250))
img_raw = img.tobytes() ### change ndarray to bytes
example = tf.train.Example(features=tf.train.Features(feature={
"label": tf.train.Feature(int64_list=tf.train.Int64List(value=[index])),
'img_raw': tf.train.Feature(bytes_list=tf.train.BytesList(value=[img_raw]))
}))
writer.write(example.SerializeToString())
Take notice of the # line,it's nessesary to do so and pass it to tf.train.Example method. Now I wanna using skimage library to do the same operation, but I cannot find the exactly API to do so, only find skimage.utl.image_as_ubytes, but it transform the image to 8-bit int style. So, I'm confused, how can I transform the image data to binary mode using skimage? In the follow it's my snnipets using skimage and it failed
for i in np.arange(0, imageNum):
image = io.imread(imageList[i])
image = transform.resize(image, (32,32,3), 0)
# - 0: Nearest-neighbor
# - 1: Bi-linear (default)
# - 2: Bi-quadratic
# - 3: Bi-cubic
# - 4: Bi-quartic
# - 5: Bi-quintic
image = util.img_as_ubyte(image)#unit8
label = int(labels[i])
example = tf.train.Example(features=tf.train.Features(feature={
'label': tf.train.Feature(int64_list=tf.train.Int64List(value=[label])),
'image_raw': bytes_feature(image)}))
writer.write(example.SerializeToString())

How to use Tensorflow

I've built multiple DNN and conVNN using tensorflow, and I can reach now a good accuracy. Now my question is how can I use this trained networks in real example.
I case of a convNN for computer vision, how can I use the model to classify a new picture ? can I generate something like convNN.exe that get images as input parameter that through the classification result out ?
Once you've trained the model, you should save it somewhere by adding code similar to
builder = saved_model_builder.SavedModelBuilder(export_path)
builder.add_meta_graph_and_variables(
sess, [tag_constants.SERVING],
signature_def_map={
'predict_images':
prediction_signature,
signature_constants.DEFAULT_SERVING_SIGNATURE_DEF_KEY:
classification_signature,
},
legacy_init_op=legacy_init_op)
builder.save()
Then, you can use Tensorflow serving to serve your model using a high-performance C++ server by running
bazel-bin/tensorflow_serving/model_servers/tensorflow_model_server \
--port=9000 --model_name=mnist \
--model_base_path=/tmp/mnist_model/
Modifying the code for your model, of course. You'll need to implement a client; there's an example for MNIST here. The guts of the client would be something like:
def do_inference(hostport, work_dir, concurrency, num_tests):
"""Tests PredictionService with concurrent requests.
Args:
hostport: Host:port address of the PredictionService.
work_dir: The full path of working directory for test data set.
concurrency: Maximum number of concurrent requests.
num_tests: Number of test images to use.
Returns:
The classification error rate.
Raises:
IOError: An error occurred processing test data set.
"""
test_data_set = mnist_input_data.read_data_sets(work_dir).test
host, port = hostport.split(':')
channel = implementations.insecure_channel(host, int(port))
stub = prediction_service_pb2.beta_create_PredictionService_stub(channel)
result_counter = _ResultCounter(num_tests, concurrency)
for _ in range(num_tests):
request = predict_pb2.PredictRequest()
request.model_spec.name = 'mnist'
request.model_spec.signature_name = 'predict_images'
image, label = test_data_set.next_batch(1)
request.inputs['images'].CopyFrom(
tf.contrib.util.make_tensor_proto(image[0], shape=[1, image[0].size]))
result_counter.throttle()
result_future = stub.Predict.future(request, 5.0) # 5 seconds
result_future.add_done_callback(
_create_rpc_callback(label[0], result_counter))
return result_counter.get_error_rate()
def main(_):
if FLAGS.num_tests > 10000:
print('num_tests should not be greater than 10k')
return
if not FLAGS.server:
print('please specify server host:port')
return
error_rate = do_inference(FLAGS.server, FLAGS.work_dir,
FLAGS.concurrency, FLAGS.num_tests)
print('\nInference error rate: %s%%' % (error_rate * 100))
if __name__ == '__main__':
tf.app.run()
This is in Python, of course, but there's no reason you couldn't use another language (e.g. Go or C++) if you wanted to create a binary executable.

How do I convert a directory of jpeg images to TFRecords file in tensorflow?

I have training data that is a directory of jpeg images and a corresponding text file containing the file name and the associated category label. I am trying to convert this training data into a tfrecords file as described in the tensorflow documentation. I have spent quite some time trying to get this to work but there are no examples in tensorflow that demonstrate how to use any of the readers to read in jpeg files and add them to a tfrecord using tfrecordwriter
I hope this helps:
filename_queue = tf.train.string_input_producer(['/Users/HANEL/Desktop/tf.png']) # list of files to read
reader = tf.WholeFileReader()
key, value = reader.read(filename_queue)
my_img = tf.image.decode_png(value) # use decode_png or decode_jpeg decoder based on your files.
init_op = tf.initialize_all_variables()
with tf.Session() as sess:
sess.run(init_op)
# Start populating the filename queue.
coord = tf.train.Coordinator()
threads = tf.train.start_queue_runners(coord=coord)
for i in range(1): #length of your filename list
image = my_img.eval() #here is your image Tensor :)
print(image.shape)
Image.show(Image.fromarray(np.asarray(image)))
coord.request_stop()
coord.join(threads)
For getting all images as an array of tensors use the following code example.
Github repo of ImageFlow
Update:
In the previous answer I just told how to read an image in TF format, but not saving it in TFRecords. For that you should use:
def _int64_feature(value):
return tf.train.Feature(int64_list=tf.train.Int64List(value=[value]))
def _bytes_feature(value):
return tf.train.Feature(bytes_list=tf.train.BytesList(value=[value]))
# images and labels array as input
def convert_to(images, labels, name):
num_examples = labels.shape[0]
if images.shape[0] != num_examples:
raise ValueError("Images size %d does not match label size %d." %
(images.shape[0], num_examples))
rows = images.shape[1]
cols = images.shape[2]
depth = images.shape[3]
filename = os.path.join(FLAGS.directory, name + '.tfrecords')
print('Writing', filename)
writer = tf.python_io.TFRecordWriter(filename)
for index in range(num_examples):
image_raw = images[index].tostring()
example = tf.train.Example(features=tf.train.Features(feature={
'height': _int64_feature(rows),
'width': _int64_feature(cols),
'depth': _int64_feature(depth),
'label': _int64_feature(int(labels[index])),
'image_raw': _bytes_feature(image_raw)}))
writer.write(example.SerializeToString())
More info here
And you read the data like this:
# Remember to generate a file name queue of you 'train.TFRecord' file path
def read_and_decode(filename_queue):
reader = tf.TFRecordReader()
_, serialized_example = reader.read(filename_queue)
features = tf.parse_single_example(
serialized_example,
dense_keys=['image_raw', 'label'],
# Defaults are not specified since both keys are required.
dense_types=[tf.string, tf.int64])
# Convert from a scalar string tensor (whose single string has
image = tf.decode_raw(features['image_raw'], tf.uint8)
image = tf.reshape(image, [my_cifar.n_input])
image.set_shape([my_cifar.n_input])
# OPTIONAL: Could reshape into a 28x28 image and apply distortions
# here. Since we are not applying any distortions in this
# example, and the next step expects the image to be flattened
# into a vector, we don't bother.
# Convert from [0, 255] -> [-0.5, 0.5] floats.
image = tf.cast(image, tf.float32)
image = tf.cast(image, tf.float32) * (1. / 255) - 0.5
# Convert label from a scalar uint8 tensor to an int32 scalar.
label = tf.cast(features['label'], tf.int32)
return image, label
Tensorflow's inception model has a file build_image_data.py that can accomplish the same thing with the assumption that each subdirectory represents a label.
Note that images will be saved in TFRecord as uncompressed tensors, possibly increasing the size by a factor of about 5. That's wasting storage space, and likely to be rather slow because of the amount of data that needs to be read.
It's far better to just save the filename in the TFRecord, and read the file on demand. The new Dataset API works well, and the documentation has this example:
# Reads an image from a file, decodes it into a dense tensor, and resizes it
# to a fixed shape.
def _parse_function(filename, label):
image_string = tf.read_file(filename)
image_decoded = tf.image.decode_jpeg(image_string)
image_resized = tf.image.resize_images(image_decoded, [28, 28])
return image_resized, label
# A vector of filenames.
filenames = tf.constant(["/var/data/image1.jpg", "/var/data/image2.jpg", ...])
# `labels[i]` is the label for the image in `filenames[i].
labels = tf.constant([0, 37, ...])
dataset = tf.data.Dataset.from_tensor_slices((filenames, labels))
dataset = dataset.map(_parse_function)
I have same problem, too.
So here is how i get the tfrecords files of my own jpeg files
Edit: add sol 1 - a better & faster way
update: Jan/5/2020
(Recommended) Solution 1: TFRecordWriter
See this Tfrecords Guide post
Solution 2:
From tensorflow official github: How to Construct a New Dataset for Retraining, use official python script build_image_data.py directly and bazel is a better idea.
Here is the instruction:
To run build_image_data.py, you can run the following command line:
# location to where to save the TFRecord data.
OUTPUT_DIRECTORY=$HOME/my-custom-data/
# build the preprocessing script.
bazel build inception/build_image_data
# convert the data.
bazel-bin/inception/build_image_data \
--train_directory="${TRAIN_DIR}" \
--validation_directory="${VALIDATION_DIR}" \
--output_directory="${OUTPUT_DIRECTORY}" \
--labels_file="${LABELS_FILE}" \
--train_shards=128 \
--validation_shards=24 \
--num_threads=8
where the $OUTPUT_DIRECTORY is the location of the sharded
TFRecords. The $LABELS_FILE will be a text file that is read by
the script that provides a list of all of the labels.
then, it should do the trick.
ps. bazel, which is made by Google, turn code into makefile.
Solution 3:
First, i reference the instruction by #capitalistpug and check the shell script file
(shell script file providing by Google: download_and_preprocess_flowers.sh)
Second, i also find out a mini inception-v3 training tutorial by NVIDIA
(NVIDIA official SPEED UP TRAINING WITH GPU-ACCELERATED TENSORFLOW)
Be careful, the following steps need to be executed in the Bazel WORKSAPCE enviroment
so Bazel build file can run successfully
First step, I comment out the part of downloading the imagenet data set that i already downloaded
and the rest of the part that i don't need of download_and_preprocess_flowers.sh
Second step, change directory to tensorflow/models/inception
where it is the Bazel environment and it is build by Bazel before
$ cd tensorflow/models/inception
Optional : If it is not builded before, type in the following code in cmd
$ bazel build inception/download_and_preprocess_flowers
You need to figure out the content in the following image
And last step, type in the following code:
$ bazel-bin/inception/download_and_preprocess_flowers $Your/own/image/data/path
Then, it will start calling build_image_data.py and creating tfrecords file
Try this script:
(used with VOC segmentation dataset:http://host.robots.ox.ac.uk/pascal/VOC/voc2012/)
import numpy as np
import tensorflow as tf
import scipy.io # to read .mat files
from PIL import Image # to read image files
def get_image(path):
jpg = Image.open(path).convert('RGB')
return np.array(jpg)
def get_label_png(path):
png = Image.open(path) # image is saved as palettised png.
arr = np.array(png)
return arr[..., None]
def get_example(image, label):
feature = {
'height': tf.train.Feature(int64_list=tf.train.Int64List(value=[image.shape[0]])),
'width': tf.train.Feature(int64_list=tf.train.Int64List(value=[image.shape[1]])),
'image': tf.train.Feature(bytes_list=tf.train.BytesList(value=[image.tobytes()])),
'label': tf.train.Feature(bytes_list=tf.train.BytesList(value=[label.tobytes()]))
}
return tf.train.Example(features=tf.train.Features(feature=feature))
## Paths ======================================
images_folder = 'data/images/' #images folder
labels_folder = 'data/labels/' #label folder
train_file = 'data/train.txt'
val_file = 'data/val.txt'
TRAIN = 'data/train.tfrecords'
VAL = 'data/val.tfrecords'
## write train dataset
with tf.io.TFRecordWriter(TRAIN) as writer:
with open(train_file) as file:
filenames = [s.rstrip('\n') for s in file.readlines()]
for name in filenames:
image = utils.get_image(images_folder+name+'.jpg')
label = utils.get_label_png(labels_folder+name+'.png')
writer.write(utils.get_example(image, label).SerializeToString())
## write validation dataset
with tf.io.TFRecordWriter(VAL) as writer:
with open(val_file) as file:
filenames = [s.rstrip('\n') for s in file.readlines()]
for name in filenames:
image = utils.get_image(images_folder+name+'.jpg')
label = utils.get_label_png(labels_folder+name+'.png')
writer.write(utils.get_example(image, label).SerializeToString())
Mentioning the Code in the Link specified by Kamil, so that the code will be available even if the Link is broken.
"""Converts image data to TFRecords file format with Example protos.
If your data set involves bounding boxes, please look at build_imagenet_data.py.
"""
from __future__ import absolute_import
from __future__ import division
from __future__ import print_function
from datetime import datetime
import os
import random
import sys
import threading
import numpy as np
import tensorflow as tf
tf.app.flags.DEFINE_string('train_directory', '/tmp/',
'Training data directory')
tf.app.flags.DEFINE_string('validation_directory', '/tmp/',
'Validation data directory')
tf.app.flags.DEFINE_string('output_directory', '/tmp/',
'Output data directory')
tf.app.flags.DEFINE_integer('train_shards', 2,
'Number of shards in training TFRecord files.')
tf.app.flags.DEFINE_integer('validation_shards', 2,
'Number of shards in validation TFRecord files.')
tf.app.flags.DEFINE_integer('num_threads', 2,
'Number of threads to preprocess the images.')
# The labels file contains a list of valid labels are held in this file.
# Assumes that the file contains entries as such:
# dog
# cat
# flower
# where each line corresponds to a label. We map each label contained in
# the file to an integer corresponding to the line number starting from 0.
tf.app.flags.DEFINE_string('labels_file', '', 'Labels file')
FLAGS = tf.app.flags.FLAGS
def _int64_feature(value):
"""Wrapper for inserting int64 features into Example proto."""
if not isinstance(value, list):
value = [value]
return tf.train.Feature(int64_list=tf.train.Int64List(value=value))
def _bytes_feature(value):
"""Wrapper for inserting bytes features into Example proto."""
return tf.train.Feature(bytes_list=tf.train.BytesList(value=[value]))
def _convert_to_example(filename, image_buffer, label, text, height, width):
"""Build an Example proto for an example.
Args:
filename: string, path to an image file, e.g., '/path/to/example.JPG'
image_buffer: string, JPEG encoding of RGB image
label: integer, identifier for the ground truth for the network
text: string, unique human-readable, e.g. 'dog'
height: integer, image height in pixels
width: integer, image width in pixels
Returns:
Example proto
"""
colorspace = 'RGB'
channels = 3
image_format = 'JPEG'
example = tf.train.Example(features=tf.train.Features(feature={
'image/height': _int64_feature(height),
'image/width': _int64_feature(width),
'image/colorspace': _bytes_feature(tf.compat.as_bytes(colorspace)),
'image/channels': _int64_feature(channels),
'image/class/label': _int64_feature(label),
'image/class/text': _bytes_feature(tf.compat.as_bytes(text)),
'image/format': _bytes_feature(tf.compat.as_bytes(image_format)),
'image/filename': _bytes_feature(tf.compat.as_bytes(os.path.basename(filename))),
'image/encoded': _bytes_feature(tf.compat.as_bytes(image_buffer))}))
return example
class ImageCoder(object):
"""Helper class that provides TensorFlow image coding utilities."""
def __init__(self):
# Create a single Session to run all image coding calls.
self._sess = tf.Session()
# Initializes function that converts PNG to JPEG data.
self._png_data = tf.placeholder(dtype=tf.string)
image = tf.image.decode_png(self._png_data, channels=3)
self._png_to_jpeg = tf.image.encode_jpeg(image, format='rgb', quality=100)
# Initializes function that decodes RGB JPEG data.
self._decode_jpeg_data = tf.placeholder(dtype=tf.string)
self._decode_jpeg = tf.image.decode_jpeg(self._decode_jpeg_data, channels=3)
def png_to_jpeg(self, image_data):
return self._sess.run(self._png_to_jpeg,
feed_dict={self._png_data: image_data})
def decode_jpeg(self, image_data):
image = self._sess.run(self._decode_jpeg,
feed_dict={self._decode_jpeg_data: image_data})
assert len(image.shape) == 3
assert image.shape[2] == 3
return image
def _is_png(filename):
"""Determine if a file contains a PNG format image.
Args:
filename: string, path of the image file.
Returns:
boolean indicating if the image is a PNG.
"""
return '.png' in filename
def _process_image(filename, coder):
"""Process a single image file.
Args:
filename: string, path to an image file e.g., '/path/to/example.JPG'.
coder: instance of ImageCoder to provide TensorFlow image coding utils.
Returns:
image_buffer: string, JPEG encoding of RGB image.
height: integer, image height in pixels.
width: integer, image width in pixels.
"""
# Read the image file.
with tf.gfile.FastGFile(filename, 'rb') as f:
image_data = f.read()
# Convert any PNG to JPEG's for consistency.
if _is_png(filename):
print('Converting PNG to JPEG for %s' % filename)
image_data = coder.png_to_jpeg(image_data)
# Decode the RGB JPEG.
image = coder.decode_jpeg(image_data)
# Check that image converted to RGB
assert len(image.shape) == 3
height = image.shape[0]
width = image.shape[1]
assert image.shape[2] == 3
return image_data, height, width
def _process_image_files_batch(coder, thread_index, ranges, name, filenames,
texts, labels, num_shards):
"""Processes and saves list of images as TFRecord in 1 thread.
Args:
coder: instance of ImageCoder to provide TensorFlow image coding utils.
thread_index: integer, unique batch to run index is within [0, len(ranges)).
ranges: list of pairs of integers specifying ranges of each batches to
analyze in parallel.
name: string, unique identifier specifying the data set
filenames: list of strings; each string is a path to an image file
texts: list of strings; each string is human readable, e.g. 'dog'
labels: list of integer; each integer identifies the ground truth
num_shards: integer number of shards for this data set.
"""
# Each thread produces N shards where N = int(num_shards / num_threads).
# For instance, if num_shards = 128, and the num_threads = 2, then the first
# thread would produce shards [0, 64).
num_threads = len(ranges)
assert not num_shards % num_threads
num_shards_per_batch = int(num_shards / num_threads)
shard_ranges = np.linspace(ranges[thread_index][0],
ranges[thread_index][1],
num_shards_per_batch + 1).astype(int)
num_files_in_thread = ranges[thread_index][1] - ranges[thread_index][0]
counter = 0
for s in range(num_shards_per_batch):
# Generate a sharded version of the file name, e.g. 'train-00002-of-00010'
shard = thread_index * num_shards_per_batch + s
output_filename = '%s-%.5d-of-%.5d' % (name, shard, num_shards)
output_file = os.path.join(FLAGS.output_directory, output_filename)
writer = tf.python_io.TFRecordWriter(output_file)
shard_counter = 0
files_in_shard = np.arange(shard_ranges[s], shard_ranges[s + 1], dtype=int)
for i in files_in_shard:
filename = filenames[i]
label = labels[i]
text = texts[i]
try:
image_buffer, height, width = _process_image(filename, coder)
except Exception as e:
print(e)
print('SKIPPED: Unexpected eror while decoding %s.' % filename)
continue
example = _convert_to_example(filename, image_buffer, label,
text, height, width)
writer.write(example.SerializeToString())
shard_counter += 1
counter += 1
if not counter % 1000:
print('%s [thread %d]: Processed %d of %d images in thread batch.' %
(datetime.now(), thread_index, counter, num_files_in_thread))
sys.stdout.flush()
writer.close()
print('%s [thread %d]: Wrote %d images to %s' %
(datetime.now(), thread_index, shard_counter, output_file))
sys.stdout.flush()
shard_counter = 0
print('%s [thread %d]: Wrote %d images to %d shards.' %
(datetime.now(), thread_index, counter, num_files_in_thread))
sys.stdout.flush()
def _process_image_files(name, filenames, texts, labels, num_shards):
"""Process and save list of images as TFRecord of Example protos.
Args:
name: string, unique identifier specifying the data set
filenames: list of strings; each string is a path to an image file
texts: list of strings; each string is human readable, e.g. 'dog'
labels: list of integer; each integer identifies the ground truth
num_shards: integer number of shards for this data set.
"""
assert len(filenames) == len(texts)
assert len(filenames) == len(labels)
# Break all images into batches with a [ranges[i][0], ranges[i][1]].
spacing = np.linspace(0, len(filenames), FLAGS.num_threads + 1).astype(np.int)
ranges = []
for i in range(len(spacing) - 1):
ranges.append([spacing[i], spacing[i + 1]])
# Launch a thread for each batch.
print('Launching %d threads for spacings: %s' % (FLAGS.num_threads, ranges))
sys.stdout.flush()
# Create a mechanism for monitoring when all threads are finished.
coord = tf.train.Coordinator()
# Create a generic TensorFlow-based utility for converting all image codings.
coder = ImageCoder()
threads = []
for thread_index in range(len(ranges)):
args = (coder, thread_index, ranges, name, filenames,
texts, labels, num_shards)
t = threading.Thread(target=_process_image_files_batch, args=args)
t.start()
threads.append(t)
# Wait for all the threads to terminate.
coord.join(threads)
print('%s: Finished writing all %d images in data set.' %
(datetime.now(), len(filenames)))
sys.stdout.flush()
def _find_image_files(data_dir, labels_file):
"""Build a list of all images files and labels in the data set.
Args:
data_dir: string, path to the root directory of images.
Assumes that the image data set resides in JPEG files located in
the following directory structure.
data_dir/dog/another-image.JPEG
data_dir/dog/my-image.jpg
where 'dog' is the label associated with these images.
labels_file: string, path to the labels file.
The list of valid labels are held in this file. Assumes that the file
contains entries as such:
dog
cat
flower
where each line corresponds to a label. We map each label contained in
the file to an integer starting with the integer 0 corresponding to the
label contained in the first line.
Returns:
filenames: list of strings; each string is a path to an image file.
texts: list of strings; each string is the class, e.g. 'dog'
labels: list of integer; each integer identifies the ground truth.
"""
print('Determining list of input files and labels from %s.' % data_dir)
unique_labels = [l.strip() for l in tf.gfile.FastGFile(
labels_file, 'r').readlines()]
labels = []
filenames = []
texts = []
# Leave label index 0 empty as a background class.
label_index = 1
# Construct the list of JPEG files and labels.
for text in unique_labels:
jpeg_file_path = '%s/%s/*' % (data_dir, text)
matching_files = tf.gfile.Glob(jpeg_file_path)
labels.extend([label_index] * len(matching_files))
texts.extend([text] * len(matching_files))
filenames.extend(matching_files)
if not label_index % 100:
print('Finished finding files in %d of %d classes.' % (
label_index, len(labels)))
label_index += 1
# Shuffle the ordering of all image files in order to guarantee
# random ordering of the images with respect to label in the
# saved TFRecord files. Make the randomization repeatable.
shuffled_index = list(range(len(filenames)))
random.seed(12345)
random.shuffle(shuffled_index)
filenames = [filenames[i] for i in shuffled_index]
texts = [texts[i] for i in shuffled_index]
labels = [labels[i] for i in shuffled_index]
print('Found %d JPEG files across %d labels inside %s.' %
(len(filenames), len(unique_labels), data_dir))
return filenames, texts, labels
def _process_dataset(name, directory, num_shards, labels_file):
"""Process a complete data set and save it as a TFRecord.
Args:
name: string, unique identifier specifying the data set.
directory: string, root path to the data set.
num_shards: integer number of shards for this data set.
labels_file: string, path to the labels file.
"""
filenames, texts, labels = _find_image_files(directory, labels_file)
_process_image_files(name, filenames, texts, labels, num_shards)
def main(unused_argv):
assert not FLAGS.train_shards % FLAGS.num_threads, (
'Please make the FLAGS.num_threads commensurate with FLAGS.train_shards')
assert not FLAGS.validation_shards % FLAGS.num_threads, (
'Please make the FLAGS.num_threads commensurate with '
'FLAGS.validation_shards')
print('Saving results to %s' % FLAGS.output_directory)
# Run it!
_process_dataset('validation', FLAGS.validation_directory,
FLAGS.validation_shards, FLAGS.labels_file)
_process_dataset('train', FLAGS.train_directory,
FLAGS.train_shards, FLAGS.labels_file)
if __name__ == '__main__':
tf.app.run()
In case of too much size in tfrecord files you use directly read bytes.
This link shows it.
TFrecords occupy more space than original JPEG images
you use this function to read bytes directly.
img_bytes = open(path,'rb').read()
reference
https://github.com/tensorflow/tensorflow/issues/9675
You can use the Kubeflow pipeline here to do the conversion:
https://aihub.cloud.google.com/u/0/p/products%2Fded3e5e5-d2e8-4d65-9b9f-5ffaa9a27ea1
Click on the Download link (create a Kubeflow cluster to run the pipeline)