CMake's find_package(OpenMP) cannot find OpenMP when using clang-12 - cmake

I'm currently trying to find OpenMP using cmake.
Below is my CMakeLists.txt:
cmake_minimum_required(VERSION 3.20)
set(CMAKE_C_STANDARD 11)
set(GCC_COMPILE_FLAGS -Wall -Werror -Wvla -O0)
SET(CMAKE_BUILD_TYPE Debug)
# Find OpenMP
find_package(OpenMP)
if (OPENMP_FOUND)
set (CMAKE_C_FLAGS "${CMAKE_C_FLAGS} ${OpenMP_C_FLAGS}")
set (CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} ${OpenMP_CXX_FLAGS}")
set (CMAKE_EXE_LINKER_FLAGS "${CMAKE_EXE_LINKER_FLAGS} ${OpenMP_EXE_LINKER_FLAGS}")
endif()
I'm using Ubuntu 20.04 and I have libomp-dev installed as shown below:
libomp-dev is already the newest version (1:10.0-50~exp1).
When I set gcc as my compiler, cmake has no issues finding OpenMP.
However, when I use clang-12 as my compiler by specifying the following cmake flags:
-DCMAKE_C_COMPILER=/usr/bin/clang-12 -DCMAKE_CXX_COMPILER=/usr/bin/clang++-12
I get the following "cannot find OpenMP error" from cmake:
CMake Error at cmake/share/cmake-3.20/Modules/FindPackageHandleStandardArgs.cmake:230 (message):
Could NOT find OpenMP_C
How should I set up my CMakeLists.txt file so that OpenMP can be found when using clang as my compiler?

As #Tsyvarev pointed out, since I had libomp-dev version 10 installed, CMake would be able to find OpenMP if I used clang-10.
So in order for me to use OpenMP with clang-12, I had to make sure that libomp-dev version 12 was installed, which I did using the following shell command:
sudo apt -y install libomp-12-dev
Now CMake has no issues finding OpenMP when I use clang-12 as my compiler.

Related

How to create CMakeLists for this make file [duplicate]

Work on Ubuntu 16
I used g++ main.cpp -lpq command for compiler my small project. Now I use Clion and wanna do same what I do with g++. But I can't add compiler flags in cmake file and get compile error.
cmake_minimum_required(VERSION 3.5.1)
project(day_g)
set(CMAKE_CXX_FLAGS "-lpq")
add_definitions(-lpq)
message("CMAKE_CXX_FLAGS is ${CMAKE_CXX_FLAGS}")
set(CMAKE_CXX_STANDARD 11)
set(SOURCE_FILES main.cpp)
add_executable(day_g ${SOURCE_FILES})
Also I run only cmake file and get CMAKE_CXX_FLAGS with -lpq flag.
CMAKE_CXX_FLAGS is -lpq
-- Configuring done
-- Generating done
How properly add compiler flags to cmake file?
Flag -l is for linker, not for compiler. This flag is used for link with libraries. CMake has special command target_link_libraries for that purpose:
target_link_libraries(day_g pq)
-lq is not a compiler flag (CFLAGS) but a linker flag.
To pass a library in a CMake project you should use:
target_link_libraries(target_name libraries...)
Note that if you specify 'q' as library the project will link with libq.a or, if you are on windows q.dll.
... in your CMakeLists.txt the correct line to add is:
target_link_libraries(day_g pq)
Note also that when you add a CFLAG you should also "remember" the previous ones that may be added by libraries or by your platform, ie:
set(CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} -O3")
To check the exact flags cmake is passing to compiler or linker you can always run, from the build directory, the following command:
make VERBOSE=1

How to get cmake generate -std=c++14 flag for qcc compiler

I'm trying to cross compile some c++ library for QNX neutrino using cmake. In CMakeLists.txt file I specified CMAKE_CXX_STANDARD 14 required, but the resulting compiler command line does not contain the -std=c++14 option.
set(CMAKE_CXX_STANDARD 14)
set(CMAKE_CXX_STANDARD_REQUIRED ON)
set(CMAKE_CXX_EXTENSIONS OFF)
I've tried using target compile features:
target_compile_features(my_library PRIVATE cxx_std_14)
but that gives me the following error:
CMake Error at CMakeLists.txt:53 (target_compile_features):
target_compile_features no known features for CXX compiler
"QCC"
version 5.4.0.
When I'm using check_cxx_compiler_flag feature, it seems to recognize the option:
include(CheckCXXCompilerFlag)
check_cxx_compiler_flag(-std=c++14 CXX14_SUPPORT)
if(CXX14_SUPPORT)
message("c++14 support found")
else()
message("c++14 unsupported")
endif()
This outputs message
c++14 support found
Running qcc manually it accepts the -std=c++14 option just fine and the code using std::make_unique compiles just fine.
Also using the native compiler (Ubuntu 18.04, gcc) everything work fine with cmake generated makefiles. make VERBOSE=1 displays the following command line (I removed some directories):
/usr/local/bin/c++ -Dshm_transfer_EXPORTS -I... -fPIC -std=gnu++14 -o CMakeFiles/shm_transfer.dir/src/SharedMemoryTransfer.cpp.o -c .../SharedMemoryTransfer.cpp
as opposed to the command line using qcc toolchain:
.../qnx700/host/linux/x86_64/usr/bin/qcc -lang-c++ -Vgcc_ntox86_64 -lang-c++ -Dshm_transfer_EXPORTS -I... -fPIC -o CMakeFiles/shm_transfer.dir/src/SharedMemoryTransfer.cpp.o -c .../SharedMemoryTransfer.cpp
I would have expected the cmake command to recognize that qcc supports the -std=c++14 option and generates the corresponding command lines because of the CMAKE_CXX_STANDARD setting.
Use
set_property(TARGET ${PROJECT_NAME} PROPERTY LINKER_LANGUAGE CXX)
set_property(TARGET ${PROJECT_NAME} PROPERTY CXX_STANDARD 14)
. Using this you can stick the compiler setting to the target, while global flags are dis encouraged and can be overwritten by other cmake consumers. This the reason I assume why the deprecated set(CMAKE_CXX_STANDARD 14) did not help you: I can not see your full CMakeLists.txt and bet you have many sub folders and other targets, which could reset the CMAKE_CXX_STANDARD them selfs. Also make sure of the ordering of the CMake commands.
And you can replace ${PROJECT_NAME} with my_library if you want.
add_compile_options(-std=gnu++14)
Add this to your project level CMakeLists.txt file, not in toolchain.

CMake + CUDA + separable compilation -> "nvcc doesn't know what to do with ' ' "

I use CMake for a project of mine involving CUDA. Recently I have had to turn on "separable compilation" of the some of my CUDA code:
set(CUDA_SEPARABLE_COMPILATION ON)
but then, building started to fail. As an example, the following would happen:
/usr/local/cuda/bin/nvcc -gencode arch=compute_30,code=compute_30 --std=c++11 \
-Xcompiler -Wall -O3 -DNDEBUG "" "" "" "" -m64 -ccbin /usr/bin/cc \
-dlink /some/where/generated_foo.cu.o -o /some/where/foo_intermediate_link.o
nvcc fatal : Don't know what to do with ''
(lines broken and names shortened for readability)
So, the problem is that something triggers CMake to add some empty (quoted) strings to the command-line, which nvcc doesn't like. Other than that the command seems fine.
Now, -O3 -DNDEBUG are my nvcc compilation flags for release builds. But I've certainly not added any empty-string flags anywhere. I tried looking into how FindCUDA constructs the nvcc invocation, but couldn't quite figure out where these empty strings are coming.
Without going into the specifics of my CMakeLists.txt, could this possibly be a well-known issue with CMake's FindaCUDA module which has a general workaround?
Note: I use GNU/Linux Mint 18.3, CMake 3.5, and CUDA 9.1.
It turns out this is a known CMake issue.
The workaround is to only set build-config-specific compilation flags for the active build config, e.g. instead of having:
set(CUDA_NVCC_FLAGS_RELEASE ${CUDA_NVCC_FLAGS_RELEASE} -O3)
set(CUDA_NVCC_FLAGS_DEBUG ${CUDA_NVCC_FLAGS_DEBUG} -g --generate-line-info)
in your CMakeLists.txt, use:
if (CMAKE_BUILD_TYPE_UPPER STREQUAL "RELEASE")
set(CUDA_NVCC_FLAGS_RELEASE ${CUDA_NVCC_FLAGS_RELEASE} -O3)
elseif (CMAKE_BUILD_TYPE_UPPER STREQUAL "DEBUG")
set(CUDA_NVCC_FLAGS_DEBUG ${CUDA_NVCC_FLAGS_DEBUG} -g --generate-line-info)
endif (CMAKE_BUILD_TYPE_UPPER STREQUAL "RELEASE")
instead (or more cases if you have multiple build types).
Another possible alternative is to not use FindCUDA at all, as CMake has added support for CUDA as a "first-class" language beginning with some 3.X release (not sure what X is).

Build MPICH with CMake

I need to force my Cmake to build and link my MPI code with MPICH. My MPICH is installed using the Ubuntu Package manager, in a standard location /usr/lib/mpich/. However, CMake still looks for the OpenMPI libraries, which I do not use. How can I instruct CMake to look for MPICH instead?
Below, you can see the output of some basic diagnostics:
$ whereis openmpi
openmpi:
$ whereis mpich
mpich: /usr/lib/mpich /usr/include/mpich
$ mpicc -v
mpicc for MPICH version 3.2
Below, I also provide the Cmake script and the errors I get from cmake and the mpirun.mpich. My Cmake is 3.5.1 and I run on Ubuntu Xenial 16.04.
cmake_minimum_required(VERSION 3.0)
message (STATUS "Adding mpiService")
find_package(MPI REQUIRED)
set(CMAKE_C_COMPILER mpicc)
set(CMAKE_CXX_COMPILER mpicxx)
set(MPI_GUESS_LIBRARY_NAME MPICH2)
message(STATUS ${MPI_INCLUDE_PATH})
message(STATUS ${MPI_C_LIBRARIES})
#add_definitions(-DOMPI_SKIP_MPICXX)
add_executable(mpiService main.cpp)
set(CMAKE_VERBOSE_MAKEFILE ON)
include_directories(SYSTEM ${MPI_INCLUDE_PATH})
target_link_libraries(
mpiService
PRIVATE
${MPI_C_LIBRARIES}
)
From the Cmake STATUS I get the following output:
/usr/lib/openmpi/include/openmpi/opal/mca/event/libevent2021/libevent/usr/lib/openmpi/include/openmpi/opal/mca/event/libevent2021/libevent/include/usr/lib/openmpi/include/usr/lib/openmpi/include/openmpi
/usr/lib/openmpi/lib/libmpi.so
And when I run the binary I get the following:
ubuntu#node1:~$ mpirun.mpich -np 2 --host node1,node2 mpiService
mpiService: error while loading shared libraries: libmpi.so.12: cannot open shared object file: No such file or directory
mpiService: error while loading shared libraries: libmpi.so.12: cannot open shared object file: No such file or directory
How can I instruct CMake to look for MPICH instead?
According to FindMPI documentation, you may set MPI_<lang>_COMPILER variable to the desired MPI compiler:
Set MPI_<lang>_COMPILER to the MPI wrapper (mpicc, etc.) of your
choice and reconfigure. FindMPI will attempt to determine all the
necessary variables using THAT compiler's compile and link flags.
set(MPI_CXX_COMPILER <path-to-mpich-compiler>)
find_package(MPI REQUIRED)
Alternatively, since CMake version 3.10, variable MPI_EXECUTABLE_SUFFIX can be set instead:
A suffix which is appended to all names that are being looked for. For instance you may set this to .mpich or .openmpi to prefer the one or the other on Debian and its derivatives.
set(MPI_EXECUTABLE_SUFFIX ".mpich")
find_package(MPI REQUIRED)
Herewith my current solution.
find_package(MPI REQUIRED)
# ----------------
# This is the only thing that made it work
# ----------------
set(MPI_C_LIBRARIES "/usr/lib/mpich/lib/libmpich.so")
set(MPI_INCLUDE_PATH "/usr/include/mpich")
# ----------------
add_executable(mpiService main.cpp)
include_directories(SYSTEM ${MPI_INCLUDE_PATH})
target_link_libraries(
mpiService
${MPI_C_LIBRARIES}
)
I personally do not like this solution, as I have to explicitly specify the path. Any other proposed solution was still building with OpenMPI. If I find a better alternative, I will re-post.

CMake cannot find OpenMP

I am trying to compile with OpenMP. My CMakeLists.txt contains the line
find_package(OpenMP REQUIRED)
and CMake errors out with
CMake Error at /opt/ros/groovy/share/catkin/cmake/catkinConfig.cmake:72 (find_package):
Could not find a configuration file for package openmp.
Set openmp_DIR to the directory containing a CMake configuration file for
openmp. The file will have one of the following names:
openmpConfig.cmake
openmp-config.cmake
Checking my filesystem, I see that I have /usr/share/cmake-2.8/Modules/FindOpenMP.cmake but no openmpConfig.cmake or openmp-config.cmake. What do I need to do to fix this?
CMake has a FindOpenMP module even in 2.x versions. See http://www.cmake.org/cmake/help/v3.0/module/FindOpenMP.html
So I'll do this:
OPTION (USE_OpenMP "Use OpenMP" ON)
IF(USE_OpenMP)
FIND_PACKAGE(OpenMP)
IF(OPENMP_FOUND)
SET(CMAKE_C_FLAGS "${CMAKE_C_FLAGS} ${OpenMP_C_FLAGS}")
SET(CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} ${OpenMP_CXX_FLAGS}")
ENDIF()
ENDIF()
According to the Modern CMake online book, this is how you configure OpenMP support with CMake:
find_package(OpenMP)
if(OpenMP_CXX_FOUND)
target_link_libraries(MyTarget PUBLIC OpenMP::OpenMP_CXX)
endif()
What you definitely should not do is to add flags like -fopenmp manually (like the accepted answer recommends) because that may not be portable.
OpenMp is not a package, if it's supported, it comes as a part of the your compiler. Try setting CMAKE_C_FLAGS or CMAKE_CXX_FLAGS accordingly. e.g:
set(CMAKE_C_FLAGS "${CMAKE_C_FLAGS} -fopenmp") activates OpenMP for compiling C sources when gcc is used. For other compilers, you should first detect the compiler and then add appropriate flags
iNFINITEi's answer doesn't work for me.
I use Ubuntu, trying to compile some code with OpenCV static library. After linking, I got this:
'"/usr/bin/ld: /usr/local/lib/libopencv_core.a(parallel.cpp.o): undefined reference to symbol 'omp_set_dynamic##OMP_1.0'"'
So I tried iNFINITEi's approach, then I have:
'CMake Error at /usr/local/share/cmake-3.13/Modules/FindPackageHandleStandardArgs.cmake:211 (message):
No REQUIRED_VARS specified for FIND_PACKAGE_HANDLE_STANDARD_ARGS()
Call Stack (most recent call first):
/usr/local/share/cmake-3.13/Modules/FindOpenMP.cmake:513 (find_package_handle_standard_args)
CMakeLists.txt:8 (FIND_PACKAGE)'
At last, I add "-fopenmp=libomp" to CMAKE_CXX_FLAGS, solved my problem.
You should install libomp with brew install libomp
i use macOS and it worked smoothly for me.