Extract words from a string in spark hadoop with scala - sql

I was using the code below to extract strings I needed in Spark SQL. But now I am working with more data in Spark Hadoop and I want to extract strings. I tried the same code, but it does not work.
val sparkConf = new SparkConf().setAppName("myapp").setMaster("local[*]")
val sc = new SparkContext(sparkConf)
val sqlContext = new org.apache.spark.sql.SQLContext(sc)
import sqlContext.implicits._
import org.apache.spark.sql.functions.{col, udf}
import java.util.regex.Pattern
//User Defined function to extract
def toExtract(str: String) = {
val pattern = Pattern.compile("#\\w+")
val tmplst = scala.collection.mutable.ListBuffer.empty[String]
val matcher = pattern.matcher(str)
while (matcher.find()) {
tmplst += matcher.group()
}
tmplst.mkString(",")
}
val Extract = udf(toExtract _)
val values = List("#always_nidhi #YouTube no i dnt understand bt i loved the music nd their dance awesome all the song of this mve is rocking")
val df = sc.parallelize(values).toDF("words")
df.select(Extract(col("words"))).show()
How do I solve this problem?

First off, you're using Spark not the way its meant to. Your DataFrame isn't partitioned at all. Use:
val values = List("#always_nidhi", "#YouTube", "no", "i", "dnt", "understand" ...). That way, each bulk of words will be assigned to a different partition, different JVMs and/or clusters (depending on the total number of partitions and size of data). In your solution, the entire sentence is assigned to a specific partition and thus there's no parallelism nor distribution.
Second, you don't have to use a UDF (try to avoid those in general).
In order to find your regex, you can simply execute:
dataFrame.filter(col("words") rlike "#\\w+")
Hope it helps :-)

Related

How to use a Dataframe, which is created from Dstream, outside of foreachRDD block?

i've been tried to working on spark streaming. My problem is I want to use wordCountsDataFrame again outside of the foreach block.
i want to conditionally join wordCountsDataFrame and another dataframe that is created from Dstream. Is there any way to do that or another approach?
Thanks.
My scala code block is below.
val Seq(projectId, subscription) = args.toSeq
val sparkConf = new SparkConf().setAppName("PubsubWordCount")
val ssc = new StreamingContext(sparkConf, Milliseconds(5000))
val credentail = SparkGCPCredentials.builder.build()
val pubsubStream: ReceiverInputDStream[SparkPubsubMessage] = PubsubUtils.createStream(ssc, projectId, None, subscription, credentail, StorageLevel.MEMORY_AND_DISK_SER_2)
val stream1= pubsubStream.map(message => new String(message.getData()))
stream1.foreachRDD{ rdd =>
val spark = SparkSession.builder.config(rdd.sparkContext.getConf).getOrCreate()
import spark.implicits._
// Convert RDD[String] to DataFrame
val wordsDataFrame = rdd.toDF("word")
wordsDataFrame.createOrReplaceTempView("words")
val wordCountsDataFrame =
spark.sql("select word, count(*) from words group by word")
wordCountsDataFrame.show()
}

Optimization query for DataFrame Spark

I try create DataFrame from Hive table. But I bad work with Spark API.
I need help to optimize the query in method getLastSession, make two tasks into one task for spark:
val pathTable = new File("/src/test/spark-warehouse/test_db.db/test_table").getAbsolutePath
val path = new Path(s"$pathTable${if(onlyPartition) s"/name_process=$processName" else ""}").toString
val df = spark.read.parquet(path)
def getLastSession: Dataset[Row] = {
val lastTime = df.select(max(col("time_write"))).collect()(0)(0).toString
val lastSession = df.select(col("id_session")).where(col("time_write") === lastTime).collect()(0)(0).toString
val dfByLastSession = df.filter(col("id_session") === lastSession)
dfByLastSession.show()
/*
+----------+----------------+------------------+-------+
|id_session| time_write| key| value|
+----------+----------------+------------------+-------+
|alskdfksjd|1639950466414000|schema2.table2.csv|Failure|
*/
dfByLastSession
}
PS. My Source Table (for example):
name_process
id_session
time_write
key
value
OtherClass
jsdfsadfsf
43434883477
schema0.table0.csv
Success
OtherClass
jksdfkjhka
23212123323
schema1.table1.csv
Success
OtherClass
alskdfksjd
23343212234
schema2.table2.csv
Failure
ExternalClass
sdfjkhsdfd
34455453434
schema3.table3.csv
Success
You can use row_number with Window like this:
import org.apache.spark.sql.expressions.Window
val dfByLastSession = df.withColumn(
"rn",
row_number().over(Window.orderBy(desc("time_write")))
).filter("rn=1").drop("rn")
dfByLastSession.show()
However, as you do not partition by any field maybe it can degrade performances.
Another thing you can change in your code, is using struct ordering to get the id_session associated with most recent time_write with one query:
val lastSession = df.select(max(struct(col("time_write"), col("id_session")))("id_session")).first.getString(0)
val dfByLastSession = df.filter(col("id_session") === lastSession)

Scala/Apache Spark Converting DataFrame column values and type, multiple when otherwise

I have a primary SQL table that I am reading into Spark and modifying to write to CassandraDB. Currently I have a working implementation for converting a gender from 0, 1, 2, 3 (integers) to "Male", "Female", "Trans", etc (Strings). Though the below method does work, it seems very inefficient to make a seperate Array with those mappings into a DataFrame, join it into the main table/DataFrame, then remove, rename, etc.
I have seen:
.withColumn("gender", when(col("gender) === 1, "male").otherwise("female")
that would allow me to continue method chaining on the primary table but have not been able to get it working with more than 2 options. Is there a way to do this? I have around 10 different columns on this table that each need their own custom conversion created. Since this code will be processing TBs of data, is there a less repetitive and more efficient way to accomplish this. Thanks for any help in advance!
case class Gender(tmpid: Int, tmpgender: String)
private def createGenderDf(spark:SparkSession): DataFrame = {
import spark.implicits._
Seq(
Gender(1, "Male"),
Gender(2, "Female"),
Gender(777, "Prefer not to answer")
).toDF
}
private def createPersonsDf(spark: SparkSession): DataFrame = {
val genderDf = createGenderDf(spark)
genderDf.show()
val personsDf: DataFrame = spark.read
.format("csv")
.option("header", "true")
.option("inferSchema", "true")
.option("delimiter", "\t")
.load(dataPath + "people.csv")
.withColumnRenamed("ID", "id")
.withColumnRenamed("name_first", "firstname")
val personsDf1: DataFrame = personsDf
.join(genderDf, personsDf("gender") === genderDf("tmpid"), "leftouter")
val personsDf2: DataFrame = personsDf1
.drop("gender")
.drop("tmpid")
.withColumnRenamed("tmpgender", "gender")
}
You can use nested when function which would eliminate your need of creating genderDf, join, drop, rename etc. As for your example you can do the following
import org.apache.spark.sql.functions._
import org.apache.spark.sql.types.StringType
personsDf.withColumn("gender", when(col("gender") === 1, "male").otherwise(when(col("gender") ===2, "female").otherwise("Prefer not to answer")).cast(StringType))
You can add more when function in the above nested structure and you can repeate the same for other 10 columns as well.

generating DataFrames in for loop in Scala Spark cause out of memory

I'm generating small dataFrames in for loop. At each round of for loop, I pass the generated dataFrame to a function which returns double. This simple process (which I thought could be easily taken care of by garbage collector) blow up my memory. When I look at Spark UI at each round of for loop it adds a new "SQL{1-500}" (my loop runs 500 times). My question is how to drop this sql object before generating a new one?
my code is something like this:
Seq.fill(500){
val data = (1 to 1000).map(_=>Random.nextInt(1000))
val dataframe = createDataFrame(data)
myFunction(dataframe)
dataframe.unpersist()
}
def myFunction(df: DataFrame)={
df.count()
}
I tried to solve this problem by dataframe.unpersist() and sqlContext.clearCache() but neither of them worked.
You have two places where I suspect something fishy is happening:
in the definition of myFunction : you really need to put the = before the body of the definition. I had typos like that compile, but produce really weird errors (note I changed your myFunction for debugging purposes)
it is better to fill your Seq with something you know and then apply foreach or some such
(You also need to replace random.nexInt with Random.nextInt, and also, you can only create a DataFrame from a Seq of a type that is a subtype of Product, such as tuple, and need to use sqlContext to use createDataFrame)
This code works with no memory issues:
Seq.fill(500)(0).foreach{ i =>
val data = {1 to 1000}.map(_.toDouble).toList.zipWithIndex
val dataframe = sqlContext.createDataFrame(data)
myFunction(dataframe)
}
def myFunction(df: DataFrame) = {
println(df.count())
}
Edit: parallelizing the computation (across 10 cores) and returning the RDD of counts:
sc.parallelize(Seq.fill(500)(0), 10).map{ i =>
val data = {1 to 1000}.map(_.toDouble).toList.zipWithIndex
val dataframe = sqlContext.createDataFrame(data)
myFunction(dataframe)
}
def myFunction(df: DataFrame) = {
df.count()
}
Edit 2: the difference between declaring function myFunction with = and without = is that the first is (a usual) function definition, while the other is procedure definition and is only used for methods that return Unit. See explanation. Here is this point illustrated in Spark-shell:
scala> def myf(df:DataFrame) = df.count()
myf: (df: org.apache.spark.sql.DataFrame)Long
scala> def myf2(df:DataFrame) { df.count() }
myf2: (df: org.apache.spark.sql.DataFrame)Unit

Programmatically adding several columns to Spark DataFrame

I'm using spark with scala.
I have a Dataframe with 3 columns: ID,Time,RawHexdata.
I have a user defined function which takes RawHexData and expands it into X more columns. It is important to state that for each row X is the same (the columns do not vary). However, before I receive the first data, I do not know what the columns are. But once I have the head, I can deduce it.
I would like a second Dataframe with said columns: Id,Time,RawHexData,NewCol1,...,NewCol3.
The "Easiest" method I can think of to do this is:
1. deserialize each row into json (every data tyoe is serializable here)
2. add my new columns,
3. deserialize a new dataframe from the altered json,
However, that seems like a waste, as it involves 2 costly and redundant json serialization steps. I am looking for a cleaner pattern.
Using case-classes, seems like a bad idea, because I don't know the number of columns, or the column names in advance.
What you can do to dynamically extend your DataFrame is to operate on the row RDD which you can obtain by calling dataFrame.rdd. Having a Row instance, you can access the RawHexdata column and parse the contained data. By adding the newly parsed columns to the resulting Row, you've almost solved your problem. The only thing necessary to convert a RDD[Row] back into a DataFrame is to generate the schema data for your new columns. You can do this by collecting a single RawHexdata value on your driver and then extracting the column types.
The following code illustrates this approach.
object App {
case class Person(name: String, age: Int)
def main(args: Array[String]) {
val sparkConf = new SparkConf().setAppName("Test").setMaster("local[4]")
val sc = new SparkContext(sparkConf)
val sqlContext = new SQLContext(sc)
import sqlContext.implicits._
val input = sc.parallelize(Seq(Person("a", 1), Person("b", 2)))
val dataFrame = input.df
dataFrame.show()
// create the extended rows RDD
val rowRDD = dataFrame.rdd.map{
row =>
val blob = row(1).asInstanceOf[Int]
val newColumns: Seq[Any] = Seq(blob, blob * 2, blob * 3)
Row.fromSeq(row.toSeq.init ++ newColumns)
}
val schema = dataFrame.schema
// we know that the new columns are all integers
val newColumns = StructType{
Seq(new StructField("1", IntegerType), new StructField("2", IntegerType), new StructField("3", IntegerType))
}
val newSchema = StructType(schema.init ++ newColumns)
val newDataFrame = sqlContext.createDataFrame(rowRDD, newSchema)
newDataFrame.show()
}
}
SELECT is your friend solving it without going back to RDD.
case class Entry(Id: String, Time: Long)
val entries = Seq(
Entry("x1", 100L),
Entry("x2", 200L)
)
val newColumns = Seq("NC1", "NC2", "NC3")
val df = spark.createDataFrame(entries)
.select(col("*") +: (newColumns.map(c => lit(null).as(c))): _*)
df.show(false)
+---+----+----+----+----+
|Id |Time|NC1 |NC2 |NC3 |
+---+----+----+----+----+
|x1 |100 |null|null|null|
|x2 |200 |null|null|null|
+---+----+----+----+----+