Trying to do a gaussian bell in Scilab - syntax-error

Question

I'm trying to do a Gaussian bell using the data I am obtaining from a matrix but everytime I try to run the program I obtain this message:
"Error: syntax error, unexpected identifier, expecting end"
The data used to obtain the gaussina bell is a matrix which includes the last point of every n displacements, which are the last position of a particle. I want to know if there is an easier way to obtain the gaussian bell in scilab because I have to also do a fit with an histogram using the same data.
function bla7()
t=4000
n=1000
l=0.067
p=%pi*2
w1=zeros(t,1);
w2=zeros(t,1);
for I=1:t
a=(grand(n,1,"unf",0,p));
x=l*cos(a)
y=l*sin(a)
z1=zeros(n,1);
z2=zeros(n,1);
for i=2:n
z1(i)=z1(i-1)+x(i);
z2(i)=z2(i-1)+y(i);
end
w1(I)=z1($)
w2(I)=z2($)
end
n=10000
w10=zeros(t,1);
w20=zeros(t,1);
for I=1:t
a=(grand(n,1,"unf",0,p));
x=l*cos(a)
y=l*sin(a)
z1=zeros(n,1);
z2=zeros(n,1);
for i=2:n
z1(i)=z1(i-1)+x(i);
z2(i)=z2(i-1)+y(i);
end
w10(I)=z1($)
w20(I)=z2($)
end
n=100
w100=zeros(t,1);
w200=zeros(t,1);
for I=1:t
a=(grand(n,1,"unf",0,p));
x=l*cos(a)
y=l*sin(a)
z1=zeros(n,1);
z2=zeros(n,1);
for i=2:n
z1(i)=z1(i-1)+x(i);
z2(i)=z2(i-1)+y(i);
end
w100(I)=z1($)
w200(I)=z2($)
end
k=70
v=12/k
c1=zeros(k,1)
for r=1:t
c=w1(r)
m=-6+v
n=-6
for g=1:k
if (c<m & c>=n) then
c1(g)=c1(g)+1
m=m+v
n=n+v
else
m=m+v
n=n+v
end
end
end
c2=zeros(k,1)
c2(1)=-6+(6/k)
for b=2:k
c2(b)=c2(b-1)+v
end
y = stdev(w1)
normal1=zeros(k,1)
normal2=zeros(k,1)
bb=-6
bc=-6+v
for wa=1:k
bd=(bb+bc)/2
gauss1=(1/(y*sqrt(2*%pi)))exp(-0.5(bb/y)^2)
gauss2=(1/(y*sqrt(2*%pi)))exp(-0.5(bc/y)^2)
gauss3=(1/(y*sqrt(2*%pi)))exp(-0.5(bd/y)^2)
gauss4=((bc-bb)/6)*(gauss1+gauss2+4*gauss3)
bb=bb+v
bc=bc+v
normal2(wa,1)=gauss4
end
normal3=normal2*4000
k=100
v=24/k
c10=zeros(k,1)
for r=1:t
c=w10(r)
m=-12+v
n=-12
for g=1:k
if (c<m & c>=n) then
c10(g)=c10(g)+1
m=m+v
n=n+v
else
m=m+v
n=n+v
end
end
end
c20=zeros(k,1)
c20(1)=-12+(12/k)
for b=2:k
c20(b)=c20(b-1)+v
end
y = stdev(w10)
normal10=zeros(k,1)
normal20=zeros(k,1)
bb=-12
bc=-12+v
for wa=1:k
bd=(bb+bc)/2
gauss10=(1/(y*sqrt(2*%pi)))exp(-0.5(bb/y)^2)
gauss20=(1/(y*sqrt(2*%pi)))exp(-0.5(bc/y)^2)
gauss30=(1/(y*sqrt(2*%pi)))exp(-0.5(bd/y)^2)
gauss40=((bc-bb)/6)*(gauss10+gauss20+4*gauss30)
bb=bb+v
bc=bc+v
normal20(wa,1)=gauss40
end
normal30=normal20*4000
k=70
v=12/k
c100=zeros(k,1)
for r=1:t
c=w100(r)
m=-6+v
n=-6
for g=1:k
if (c<m & c>=n) then
c100(g)=c100(g)+1
m=m+v
n=n+v
else
m=m+v
n=n+v
end
end
end
c200=zeros(k,1)
c200(1)=-6+(6/k)
for b=2:k
c200(b)=c200(b-1)+v
end
y = stdev(w100)
normal100=zeros(k,1)
normal200=zeros(k,1)
bb=-6
bc=-6+v
for wa=1:k
bd=(bb+bc)/2
gauss100=(1/(y*sqrt(2*%pi)))exp(-0.5(bb/y)^2)
gauss200=(1/(y*sqrt(2*%pi)))exp(-0.5(bc/y)^2)
gauss300=(1/(y*sqrt(2*%pi)))exp(-0.5(bd/y)^2)
gauss400=((bc-bb)/6)*(gauss100+gauss200+4*gauss300)
bb=bb+v
bc=bc+v
normal200(wa,1)=gauss400
end
normal300=normal200*4000
bar(c20,c10,1.0,'white')
plot(c20, normal30, 'b-')
bar(c2,c1,1.0,'white')
plot(c2, normal3, 'r-')
bar(c200,c100,1.0,'white')
plot(c200, normal300, 'm-')
poly1.thickness=3;
xlabel(["x / um"]);
ylabel("molecules");
gcf().axes_size=[500,500]
a=gca();
a.zoom_box=[-12,12;0,600];
a.font_size=4;
a.labels_font_size=5;
a.x_label.font_size = 5;
a.y_label.font_size = 5;
ticks = a.x_ticks
ticks.labels =["-12";"-10";"-8";"-6";"-4";"-2";"0";"2";"4";"6";"8";"10";"12"]
ticks.locations = [-12;-10;-8;-6;-4;-2;0;2;4;6;8;10;12]
a.x_ticks = ticks
endfunction

Answer 1

Each and every one of your gauss variables are missing the multiplication operator in two places. Check every line at it will run. For example, this:
gauss1=(1/(y*sqrt(2*%pi)))exp(-0.5(bb/y)^2)
should be this:
gauss1=(1/(y*sqrt(2*%pi))) * exp(-0.5 * (bb/y)^2)
As for the Gaussian bell, there is no standard function in Scilab. However, you could define a new function to make things more clear in your case:
function x = myGauss(s,b_)
x = (1/(s*sqrt(2*%pi)))*exp(-0.5*(b_/s)^2)
endfunction
Actually, while we're at it, your whole code is really difficult to read. You should define functions instead of repeating code: it helps clarify what you mean, and if there is a mistake, you need to fix only one place. Also, I personally do not recommend that you enclose everything in a function like bla7() because it makes things harder to debug. Your example could be rewritten like this:
The myGauss function;
A function w_ to calculate w1, w2, w10, w20, w100 and w200;
A function c_ to calculate c1, c2, c10, c20, c100 and c200;
A function normal_ to calculate normal1, normal2, normal10, normal20, normal100 and normal200;
Call all four functions as many times as needed with different inputs for different results.
If you do that, your could will look like this:
function x = myGauss(s,b_)
x = (1 / (s * sqrt(2 * %pi))) * exp(-0.5 * (b_/s)^2);
endfunction
function [w1_,w2_] = w_(t_,l_,n_,p_)
w1_ = zeros(t_,1);
w2_ = zeros(t_,1);
for I = 1 : t_
a = (grand(n_,1,"unf",0,p_));
x = l_ * cos(a);
y = l_ * sin(a);
z1 = zeros(n_,1);
z2 = zeros(n_,1);
for i = 2 : n_
z1(i) = z1(i-1) + x(i);
z2(i) = z2(i-1) + y(i);
end
w1_(I) = z1($);
w2_(I) = z2($);
end
endfunction
function [c1_,c2_] = c_(t_,k_,v_,w1_,x_)
c1_ = zeros(k_,1)
for r = 1 : t_
c = w1_(r);
m = -x_ + v_;
n = -x_;
for g = 1 : k_
if (c < m & c >= n) then
c1_(g) = c1_(g) + 1;
m = m + v_;
n = n + v_;
else
m = m + v_;
n = n + v_;
end
end
end
c2_ = zeros(k_,1);
c2_(1) = -x_ + (x_/k_);
for b = 2 : k_
c2_(b) = c2_(b-1) + v_;
end
endfunction
function [normal1_,normal2_,normal3_] = normal_(k_,bb_,bc_,v_,w1_)
y = stdev(w1_);
normal1_ = zeros(k_,1);
normal2_ = zeros(k_,1);
for wa = 1 : k_
bd_ = (bb_ + bc_) / 2;
gauss1 = myGauss(y,bb_);
gauss2 = myGauss(y,bc_);
gauss3 = myGauss(y,bd_);
gauss4 = ((bc_ - bb_) / 6) * (gauss1 + gauss2 + 4 * gauss3);
bb_ = bb_ + v_;
bc_ = bc_ + v_;
normal2_(wa,1) = gauss4;
end
normal3_ = normal2_ * 4000;
endfunction
t = 4000;
l = 0.067;
p = 2 * %pi;
n = 1000;
k = 70;
v = 12 / k;
x = 6;
bb = -x;
bc = -x + v;
[w1,w2] = w_(t,l,n,p);
[c1,c2] = c_(t,k,v,w1,x);
[normal1,normal2,normal3] = normal_(k,bb,bc,v,w1);
bar(c2,c1,1.0,'white');
plot(c2, normal3, 'r-');
n = 10000;
k = 100;
v = 24 / k;
x = 12;
bb = -x;
bc = -x + v;
[w10,w20] = w_(t,l,n,p);
[c10,c20] = c_(t,k,v,w10,x);
[normal10,normal20,normal30] = normal_(k,bb,bc,v,w10);
bar(c20,c10,1.0,'white');
plot(c20, normal30, 'b-');
n = 100;
k = 70;
v = 12 / k;
x = 6;
bb = -x;
bc = -x + v;
[w100,w200] = w_(t,l,n,p);
[c100,c200] = c_(t,k,v,w100,x);
[normal100,normal200,normal300] = normal_(k,bb,bc,v,w100);
bar(c200,c100,1.0,'white');
plot(c200, normal300, 'm-');
poly1.thickness=3;
xlabel(["x / um"]);
ylabel("molecules");
gcf().axes_size=[500,500]
a=gca();
a.zoom_box=[-12,12;0,600];
a.font_size=4;
a.labels_font_size=5;
a.x_label.font_size = 5;
a.y_label.font_size = 5;
ticks = a.x_ticks
ticks.labels =["-12";"-10";"-8";"-6";"-4";"-2";"0";"2";"4";"6";"8";"10";"12"]
ticks.locations = [-12;-10;-8;-6;-4;-2;0;2;4;6;8;10;12]
a.x_ticks = ticks