autoscan produced a series of function checks (AC_FUNC_* and AC_CHECK_FUNCS), and AC_CHECK_HEADERS. Now I need to pull in gnulib code. Do I just try to import every function and header that autoscan identified? Half of them don't show up in the gnulib-tool --list output. Or do I wait until ./configure fails on some platform?
My suggestion would be to ignore autoscan entirely and instead try to figure out which platform you're targeting.
In particular autoscan will try to add tests for functions that are available in every single platform since 1990, but might be missing on a non-SysV OS for instance.
Start with a base platform target (such as C99 and the latest POSIX), and then figure out which other OSes you want to target and what they are missing.
Don't try to cover bases for OSes you have no access to, it's likely you won't actually know what is needed for them to build, let alone run.
Full disclosure: I have changed my opinion on gnulib over the years and not suggest it to be used anymore, if at all possible.
There are two ways to determine which list of gnulib modules you might need:
You can scan your source code or your object files (with nm) by hand.
You can import all the POSIX header file modules via gnulib-tool, then add -DGNULIB_POSIXCHECK to the CFLAGS, compile your package, and analyze the resulting warnings.
Also, some gnulib overrides exist for the sake of old platforms only. You can read the list of what each override fixes, and apply your own judgement.
Related
I want to impose reflecting BCs at the non-periodic direction of my simulation box. To this end I need to use fix wall/reflect
Is there any way for direct inclusion of this command in PyIron?
Best regards
wall/reflect is currently not natively supported by pyiron, but if you know the LAMMPS command, you can include it for example via:
job.input.control['fix___fixname'] = 'all wall/reflect xlo EDGE xhi EDGE'
(I took the first example on the LAMMPS page you shared). If your LAMMPS input is not too complicated, this pyiron should be able to place this command in the appropriate position.
Sams's solution is definitely the easiest way if you just want to insert one fix. But you can even load full LAMMPS scripts inside pyiron, here is an example:
https://github.com/jan-janssen/pyiron-free-energy/blob/master/free_energy.ipynb
The important part is to keep the read_data structure.inp and the include potential.inp to use the structure and interatomic potential defined by pyiron. Finally if you also copy the dump, dump_modify and thermo part you can use the pyiron parsers, otherwise you can always parse the output yourself, like I demonstrated in the above example.
I'm looking for a way to "enter" a module in the REPL, so that I can access all symbols without qualification (not just the exported ones), and any function (re)defined at the REPL gets in the specified module. (Basically this is the functionality of Common Lisp's in-package macro.)
This would be useful in a REPL-oriented workflow, as I would be able to write the same code in the REPL as in the module I am developing.
The manual recommends a workflow where I qualify everything, but that seems annoying.
I started a package called REPLMods.jl for this a while back. It should probably be polished up, but I haven't had the time.
I spoke to core Julia members and there was interest in getting it merged into base once things were clean, but again, no time!
I know this isn't quite what you're asking, but just in case the 'obvious' had not occured to you (or future visitors to the question), assuming you loaded a module with an annoyingly cumbersome name, e.g.
import LaTeXStrings
and you don't want to have to type LaTeXStrings all the time just to explore its accessibles, i.e.
LaTeXStrings.[TAB]
you can just assign the imported module as a whole to another variable, i.e.
const l = LaTeXStrings
I'm sure in the absence of a more appropriate built-in solution, at least typing l.[TAB] as opposed to LaTeXStrings.[TAB]is a lot more tolerable :)
(I find it odd, in fact, that julia doesn't seem to support the import LaTeXStrings as l syntax ...)
It's 2020, I'm using Julia 1.4, and was unable to get REPLMods.jl to work. I think the following seem good enough for the time being:
ExportAll.jl - see Exporting all symbols in Julia for a discussion (just that one shouldn't ExportAll to replace normal export)
and Revise.jl
So, there is this cool package I've found but it leaves a lot to be desired. Since it made more sense to modify it, rather than build a new one myself, I changed the code in the corresponding source directory (C:\Users[my username].julia\v0.4[package name]\src). I made sure to modify not just the base.jl file, but also the [name of package].jl one so that there are no issues with dependencies or the new functions I added. I tried running the package several times to ensure that Julia doesn't spit out any errors or exceptions (the original package had some deprecated stuff, which I also remedied). Still, I fail to use the additional functionality of the package that I augmented. Any help would be greatly appreciated.
I'm using Julia ver 0.4.2, on a Windows 7 machine. As an IDE I use Notepad++. Thanks
I'm not exactly sure what you tried, but here's a guess as to what's going on: if you've already loaded the package in your julia session, edits to the source files won't take effect unless you explicitly reload the package. There are some good workflow tips here, and more explanation of the module system here.
However, for a newbie the easiest thing might be to quit julia and restart.
As far as making changes to a package, as Gnumic commented, your best approach is to make a branch and commit your changes there. Once you become convinced your changes represent an improvement, consider sharing your changes with the rest of the world.
After a search here on the forum I found a question like that, and it redirected me to a tutorial which gave em some basic instructions on manipulating SpringBoard with CapitainHook.
To start I'd like to do it with normal %hooks only. Any hint where I could start?
This little introduction is meant for whoever has a minimal knowledge on Objective-C and knows what he is doing.
NOTE: I will refer to the theos install path as $THEOS. This could be ~/theos, /var/theos, /usr/theos... Yeah.
The most popular way of creating MobileSubstrate extensions, also known as tweaks, is using Dustin Howett's theos build suite. Details follow:
What is theos?
So, we should start with what theos is not:
The Operating System
A Greek God
A compiler
And of course, what theos doesn't do:
Teaches you how to code.
Creates tweaks without having you to think
Sets up a whole building environment and/or installs the iOS SDK.
Theos is a cross-platform suite of development tools for managing, developing, and deploying iOS software without the use of Xcode, featuring:
A robust build system driven by GNU Make, which makes its Makefiles easily deployable through everywhere with theos installed too.
NIC, a project templating system which creates ready-to-build empty projects for varying purposes.
Logos, a built-in preprocessor-based library of directives designed to make MobileSubstrate extension development easy and with optimal code generation.
Automated packaging: Theos is capable of directly creating DEB packages for distribution in Cydia, the most popular mean of package distribution in the jailbreak scene.
How to install theos?
On OSX: Have the iOS SDK installed and follow these instructions.
On iOS: Install the BigBoss Recommended Tools package from Cydia and run installtheos3.
On Linux: Find a mean to have the toolchain installed, and follow these instructions.
On Windows: Nothing is impossible, but if you actually manage to do so, please let me know. :P
How to use theos?
This is a very asked question and too vague. Since theos is a whole suite of development tools, it doesn't make sense to ask How to use it, but more specifically, to ask How to create software using theos.
First of all, always have the Theos Makefile Reference in hand. It covers the basics of creating a theos Makefile, and that includes solving your linking issues adding a framework or private framework to the project.
Now, you can either create your own Makefile from scratch, create your little theos clone/symlink and start coding, but theos makes this step easier. You can just use nic.pl.
A very simple example of running NIC to create something can be found here. It's very straight-forward and sets you up right-away for programming.
Now, here's where we start getting back to topic.
Creating a tweak with theos
First of all, do not run NIC when inside $THEOS/bin. NIC will create the project directory exactly where you're running it from, and it avoids any project being created in $THEOS/bin. Therefore, you'll end up with a simple error which can be avoided by creating the project directory somewhere decent.
Run $THEOS/bin/nic.pl and choose the iphone/tweak template. You will be prompted by simple information which you may well know well how to answer, except for the last field: MobileSubstrate bundle filter.
Since a big part of MobileSubstrate is not just the hooker (the library which switches original methods/functions with yours), but also the loader (the part which gets your hooking to be inserted into certain processes), you have to supply this basic information for the Loader to know where to load your tweak. This field is but the bundle identifier for the application where this project will be inserted.
com.apple.springboard, the default option is the bundle identifier for SpringBoard, the application which is:
The iOS Homescreen
The launcher/displayer of common applications
The iOS Status Bar
Handler of some high-level essential background processes
Therefore, there's where many tweaks take place, altering behavior from something as trivial as app launching to something like how the whole homescreen UI looks like.
Programming a tweak with Logos
Now, the directory generated by NIC will contain:
The Theos Makefile, where you'll change information related to compiling
The control file, where you'll change packaging-related information
A symbolic link (or shortcut) to $THEOS named theos/
The main code file, defaulted as Tweak.xm. It is already added to the Makefile for compiling, so you can start coding right-away with it!
On knowing what to do
Now, you don't have SpringBoard's source code laying around, and you can't guess what methods to hook from nowhere. Therefore, you need a SpringBoard header set. For that, you need to use a tool named class-dump-z and run it into the SpringBoard binary (which is inside the iOS filesystem) to obtain header files including all class declarations and its methods inside the application.
From that (a deal of guessing and logging a method call is involved) you can start messing around with what you want in a tweak.
Of course, if you are not hooking SpringBoard you can use class-dump-z as you would in other binaries, such as UIKit, MobileSafari, etc.
Note that for when reversing App Store apps, they'll be encrypted. You'll need to decrypt those (I am unfortunately not allowed to tell you how-to), and then just run class-dump-z on them.
On obtaining private headers
Stuff like preference bundles require the headers for private frameworks, in that case the Preferences framework's headers. Else you'll get endless missing declaration errors (as I guess you could assume).
Getting them has the same logic applied the previous step. Run class-dump-z on, at this case, the Preferences binary and throw the headers at your INCLUDEPATH. The INCLUDEPATH is where the compiler will go looking for headers you include like #include <stdio.h>. Yes, stdio.h is inside one of the directories which build a compiler's INCLUDEPATH!
When compiling with a theos Makefile, $THEOS/include counts as part of your INCLUDEPATH, which means, you can just throw your dumped headers over there and include them later.
(Note that class-dumped headers aren't always perfect, so you're likely to have a couple of header-related compilation errors which can be easily fixed with something like removing a #import directive or changing it, or adding a couple of declarations.)
Code tips
You can't link against SpringBoard, so whenever you require a class from SpringBoard you have to use either the Logos %c directive or the objc_getClass function, as defined at <objc/runtime.h> to get it. Example: [%c(SBUIController) sharedInstance], [objc_getClass("SBUIController") sharedInstance].
When not knowing what a method does or how something works in SpringBoard, try disassembling it with IDA or others. I use IDA Demo (<- noob!) for my disassembling.
Looking at example code is amazingly helpful for both learning and figuring out how something works inside SpringBoard or others (again..). Great people at GitHub to have a projects looked at are rpetrich, chpwn, DHowett, EvilPenguin, and of course way more.
To also find about how SpringBoard and other works (...), have a look at a class's article at the iPhone Dev Wiki!
Epilogue
Wait, where's the good part? Where do I learn about coding in Tweak.xm?
Well, the original question was actually How to start MobileSubstrate tweaks programming?. You're all setup, hopefully with all headers placed, ready to type in make and see your project magically compiled with theos.
All you need to do is now to actually dig into your headers or your disassembly and go hooking, calling, etc.!
Logos Reference contains exactly how to hook and use other features of Logos, and the MobileSubstrate article on the devwiki is also a great read.
In case there is any doubt, don't hesitate joining the irc.saurik.com #theos IRC channel. It's a great way to discuss theos-related topics and ask questions. I'm mostly there, along with other greatly smart people ;)
You are looking for Theos created by DHowett.. Theos allows you to make tweaks, but it doesn't give you everything you need. You don't get every header for iOS, so you have to class-dump-z the frameworks/private-frameworks from the iOS SDK. Get started here: http://iphonedevwiki.net/index.php/Theos/Getting_Started, or join irc.saurik.net #theos for more help. You can also look at my projects that use theos: https://github.com/evilpenguin
You sound like you're looking for theos. Take a look at this, it should help get you started.
this is my first post, and it covers something which I've been trying to get working on and off for about a year now.
Essentially it boils down to the following: I have a copy of newlib which I'm trying to get working on an LPC2388 (an ARM7TDMI from NXP). This is on a linux box using arm-elf-gcc
The question I have is that I've been looking at a lot of the tutorials talking about porting newlib, and they all talk about the stubs (like exit, open, read/write, sbrk), and I have a pretty good idea of how to implement all of these functions. But where should I put them?
I have the newlib distribution from sources.redhat.com/pub/newlib/newlib-1.18.0.tar.gz and after poking around I found "syscalls.c" (in newlib-1.18.0/newlib/libc/sys/arm) which contains all of the stubs which I have to update, but they're all filled in with rather finished looking code (which does NOT seem to work without the crt0.S, which itself does not work with my chip).
Should I just be wiping out those functions myself, and re-writing them? Or should I write them somewhere else. Should I make a whole new folder in newlib/libc/sys with the name of my "architecture" and change the target to match?
I'm also curious if there's proper etiquette on distribution of something like this after releasing it as an open source project. I currently have a script which downloads binutils, arm-elf-gcc, newlib, and gdb, and compiles them. If I am modifying files which are in the newlib directory, should I hand a patch which my script auto-applies? Or should I add the modified newlib to the repository?
Thanks for bothering to read! Following this is a more detailed breakdown of what I'm doing.
For those who want/need more info about my setup:
I'm building a ARM videogame console based loosely on the Uzebox project ( http://belogic.com/uzebox/ ).
I've been doing all sorts of things pulling from a lot of different resources as I try and figure it out. You can read about the start of my adventures here (sparkfun forums, no one responds as I figure it out on my own): forum.sparkfun.com/viewtopic.php?f=11&t=22072
I followed all of this by reading through the Stackoverflow questions about porting newlib and saw a few of the different tutorials (like wiki.osdev.org/Porting_Newlib ) but they also suffer from telling me to implements stubs without mentioning where, who, what, when, or how!
But where should I put them?
You can put them where you like, so long as they exist in the final link. You might incorporate them in the libc library itself, or you might keep that generic, and have the syscalls as a separate target specific object file or library.
You may need to create your own target specific crt0.s and assemble and link it for your target.
A good tutorial by Miro Samek of Quantum Leaps on getting GNU/ARM development up and running is available here. The examples are based on an Atmel AT91 part so you will need to know a little about your NXP device to adapt the start-up code.
A ready made Newlib porting layer for LPC2xxx was available here, but the links ot teh files appear to be broken. The same porting layer is used in Martin Thomas' WinARM project. This is a Windows port of GNU ARM GCC, but the examples included in it are target specific not host specific.
You should only need to modify the porting layer on Newlib, and since it is target and application specific, you need not (in fact probably should not) submit your code to the project.
When I was using newlib that is exactly what I did, blew away crt0.s, syscalls.c and libcfunc.c. My personal preference was to link in the replacement for crt0.s and syscalls.c (rolled the few functions in libcfunc into the syscalls.c replacement) based on the embedded application.
I never had an interest in pushing any of that work back into the distro, so cannot help you there.
You are on the right path though, crt0.S and syscalls.c are where you want to work to customize for your target. Personally I was interested in a C library (and printf) and would primarily neuter all of the functions to return 0 or 1 or whatever it took to get the function to just work and not get in the way of linking, periodically making the file I/O functions operate on linked in data in rom/ram. Basically without replacing or modifying any other files in newlib I had a fair amount of success, so you are on the right path.