Error when installing RMySQL on Windows 7 - rmysql

I have followed the instructions on this website for installing RMySQL on my 64 bit Windows 7 machine: http://www.ahschulz.de/2013/07/23/installing-rmysql-under-windows/
However I get the following error message: Any ideas? I have searched for some time for an answer with no luck - I wonder if the problem is the lack of a file called x86_64-w64-mingw32-gcc but I cannot figure out where this should come from or be stored.
install.packages("RMySQL", type = "source")
Installing package(s) into ‘C:/Users/lokell/Documents/R/win-library/2.14’
(as ‘lib’ is unspecified)
Warning: dependency ‘DBI’ is not available
trying URL 'http://cran.ma.imperial.ac.uk/src/contrib/RMySQL_0.10.2.tar.gz'
Content type 'application/x-gzip' length 52150 bytes (50 Kb)
opened URL
downloaded 50 Kb
* installing *source* package 'RMySQL' ...
** package 'RMySQL' successfully unpacked and MD5 sums checked
** libs
rm -f RMySQL-init.o connection.o db-apply.o driver.o exception.o fields.o result.o utils.o
"C:/PROGRA~1/R/R-214~1.1/bin/x64/Rscript.exe" "../tools/winlibs.R"
x86_64-w64-mingw32-gcc -I"C:/PROGRA~1/R/R-214~1.1/include" -I../windows/libmariadbclient-2.1.0/include -I"d:/RCompile/CRANpkg/extralibs64/local/include" -O2 -Wall -std=gnu99 -mtune=core2 -c RMySQL-init.c -o RMySQL-init.o
x86_64-w64-mingw32-gcc: not found
make: *** [RMySQL-init.o] Error 127
ERROR: compilation failed for package 'RMySQL'
* removing 'C:/Users/lokell/Documents/R/win-library/2.14/RMySQL'
The downloaded packages are in
‘C:\Users\lokell\AppData\Local\Temp\RtmpkPZRnB\downloaded_packages’
Warning messages:
1: running command 'C:/PROGRA~1/R/R-214~1.1/bin/x64/R CMD INSTALL -l "C:/Users/lokell/Documents/R/win-library/2.14" C:\Users\lokell\AppData\Local\Temp\RtmpkPZRnB/downloaded_packages/RMySQL_0.10.2.tar.gz' had status 1
2: In install.packages("RMySQL", type = "source") :
installation of package ‘RMySQL’ had non-zero exit status

Related

Error installing prawn-gmagick within Heroku stack 20 due to invalid wand/magick_wand.h path

Here is the error I'm getting when trying to deploy to Heroku using the most recent stack (20)
Gem::Ext::BuildError: ERROR: Failed to build gem native extension.
current directory:
/tmp/build_20bfe735/vendor/bundle/ruby/2.6.0/gems/prawn-gmagick-0.0.9/ext/image
/tmp/build_20bfe735/vendor/ruby-2.6.6/bin/ruby -I
/tmp/build_20bfe735/vendor/ruby-2.6.6/lib/ruby/2.6.0 -r
./siteconf20210328-11397-1gaqmyj.rb extconf.rb
creating Makefile
current directory:
/tmp/build_20bfe735/vendor/bundle/ruby/2.6.0/gems/prawn-gmagick-0.0.9/ext/image
make "DESTDIR=" clean
current directory:
/tmp/build_20bfe735/vendor/bundle/ruby/2.6.0/gems/prawn-gmagick-0.0.9/ext/image
make "DESTDIR="
compiling image.c
image.c:3:10: fatal error: wand/magick_wand.h: No such file or directory
3 | #include <wand/magick_wand.h>
| ^~~~~~~~~~~~~~~~~~~~
compilation terminated.
make: *** [Makefile:245: image.o] Error 1
make failed, exit code 2
Same error after I tried this buildpack with graphicsmagick
https://elements.heroku.com/buildpacks/bogini/heroku-buildpack-graphicsmagick
So, after playing a bit I made it work by adding 3 additional dependencies to the Aptfile in the example above
libgraphicsmagick++3
libgraphicsmagick++1-dev
libgraphicsmagick-q16-3
So the final Aptfile looks like this
debhelper
g++
gsfonts
libbz2-dev
libexif-dev
libfreetype6-dev
libice-dev
libjbig-dev
libjpeg-dev
liblcms2-dev
libltdl-dev
libpng-dev
libsm-dev
libtiff-dev
libwebp-dev
libwmf-dev
libx11-dev
libxext-dev
libxml2-dev
perl
sharutils
transfig
x11proto-core-dev
zlib1g-dev
libgraphicsmagick++3
libgraphicsmagick++1-dev
libgraphicsmagick-q16-3
And my buildpacks setup:
1. https://github.com/heroku/heroku-buildpack-apt
2. https://github.com/bogini/heroku-buildpack-graphicsmagick
3. heroku/ruby
Do you guys see any problem with any of those dependencies and setup?

FASTCGI Install on Raspberry PI Error - Cannot Manually Build Package

I have searched the internet all weekend and cannot find anyone who has had a similar error. I am trying to install libapache-mod-factcgi but the package errors out and I cannot figure out why.
pi#applejacks:/tmp $ sudo apt-get source -b libapache2-mod-fastcgi
Reading package lists... Done
Building dependency tree
Reading state information... Done
Skipping already downloaded file 'libapache-mod-fastcgi_2.4.7~0910052141-1.1+deb8u1.dsc'
Skipping already downloaded file 'libapache-mod-fastcgi_2.4.7~0910052141.orig.tar.gz'
Skipping already downloaded file 'libapache-mod-fastcgi_2.4.7~0910052141-1.1+deb8u1.diff.gz'
Need to get 0 B of source archives.
Skipping unpack of already unpacked source in libapache-mod-fastcgi-2.4.7~0910052141
dpkg-buildpackage: source package libapache-mod-fastcgi
dpkg-buildpackage: source version 2.4.7~0910052141-1.1+deb8u1
dpkg-buildpackage: source distribution jessie
dpkg-buildpackage: source changed by Andreas Beckmann <anbe#debian.org>
dpkg-buildpackage: host architecture armhf
dpkg-source --before-build libapache-mod-fastcgi-2.4.7~0910052141
debian/rules clean
dh_listpackages: Please specify the compatibility level in debian/compat
dh_listpackages: Compatibility levels before 5 are no longer supported (level 1 requested)
/usr/share/cdbs/1/rules/dpatch.mk:33: CDBS WARNING: dpatch.mk is deprecated since 0.4.85 - please use source format 3.0 (quilt) instead
test -x debian/rules
rmdir /tmp/libapache-mod-fastcgi-2.4.7~0910052141/build-tmp
rmdir: failed to remove ‘/tmp/libapache-mod-fastcgi-2.4.7~0910052141/build-tmp’: No such file or directory
/usr/share/cdbs/1/rules/buildcore.mk:46: recipe for target 'cleanbuilddir' failed
make: [cleanbuilddir] Error 1 (ignored)
dh_clean
dh_clean: Please specify the compatibility level in debian/compat
/usr/share/cdbs/1/rules/debhelper.mk:189: recipe for target 'clean' failed
make: *** [clean] Error 2
dpkg-buildpackage: error: debian/rules clean gave error exit status 2
Build command 'cd libapache-mod-fastcgi-2.4.7~0910052141 && dpkg-buildpackage -b -uc' failed.
E: Child process failed
I'm trying to build Apache2 on RPi also. These commands got the .deb building for me:
cd libapache-mod-fastcgi-2.4.7~0910052141;
echo 10 > debian/compat;
dpkg-buildpackage -b -uc
Then cd .. to go one level up, then install the package with dpkg -i ./libapache2-mod-fastcgi_2.4.7~0910052141-1.1+deb8u1_armhf.deb

OS X - 10.10.4 ld: symbol(s) not found for architecture x86_64

I am installing NS2 2.35 in my macbook having OS X 10.10.4. The Xcode which i have install is Xcode 6.4. While installing I am getting following error:
ld: symbol (s) not found for architecture x86_64
clang: error: linker command failed with exit code 1 (use -v to see invocation)
make: *** [octlsh] Error 1
octl-1.14 make failed! Exiting...
From the following link I have downloaded NS2:
https://drive.google.com/file/d/0B7S255p3kFXNSGJCZ2YzUGJDVk0/view
Following steps I have use to install NS2:
Install Xcode
Unzip or untar ns-2.35 using the command "tar zxvf ns-allinone-2.35-xxx.tar.gz" (without quotes)
The ns-2.35 configuration files contains the path to xlibdir and xincdir, so you need not include the path for those directories.
kindly ensure that the path to xlibdir and xincdir are installed on your Mac OS(Xcode)
execute the command ./install inside the directory (~ns-allinone-2.35-xxx/) (use terminal to install) .
Once installed successfully, the path setting information will be provided to you. copy those informations and put it in a file called .profile or .bash_profile (please note that there is a dot in these files)
finally execute the command "source .profile" (wihtout quotes) and logout and login back.
After step 5 i.e. ./install i got above mentioned error.
Kindly help me to solve this problem.
clang: error: linker command failed with exit code 1
The version you got is my "Oct 2014 update" ns-allinone-2.35_gcc482.tar.gz, for gcc/g++ versions 4.6 .. 5.2 . Not clang, AFAIK.
Path´s : # cd ns-2.35/ && make install ; cd ../nam-1.15/ && make install
P.S. : There's a patch for OS X 10 → http://myns2work.blogspot.dk/2013/08/installing-ns-235-on-mountain-lion-and.html
Ref. Google, ns-allinone-2.35 with OS X 10 https://www.google.com/webhp?hl=all&gws_rd=ssl#hl=en&q=ns-allinone-2.35+with+OS+X+10

spnavcfg - SpaceNavigator in Arch Linux

Attempting to install my SpaceNavigator on arch linux using the open source spacenavd service. The service starts up fine, and I have the libspacenav and spacenavd packages installed. I am attempting to build spnavcfg from the sourceforge website.
http://sourceforge.net/projects/spacenav/files/
I downloaded libspacenav and spacenavd from the AUR, ran makepkg -s, and then sudo pacman -U and installed the packages locally, no issues.
spacenavcfg is another story, will probably have to build my own ABS package before I can use pacman on it, however when I extract the contents from sourceforge, it does not compile. I can successfully run sudo ./configure, but when I type 'make', I get the following error:
gcc -o spnavcfg spnavcfg.o front.o back.o cfgfile.o `pkg-config --libs gtk+-2.0`
/usr/bin/ld: front.o: undefined reference to symbol 'XOpenDisplay'
/usr/lib/libX11.so.6: error adding symbols: DSO missing from command line
collect2: error: ld returned 1 exit status
Makefile:16: recipe for target 'spnavcfg' failed
make: *** [spnavcfg] Error 1
I have not been able to figure out what the issue is, the usual google/forum trolling has not yielded any answers.
Thanks!
Barrett
Try with this AUR PKGBUILD this time: https://aur.archlinux.org/packages/spnavcfg/

Install MatPlotLib 1.2.x on OS X Lion 10.7.4 and Python 3.2.2

I asked a question a couple of days ago regarding installing numpy on the same system. Thankfully, I managed to solve that one myself but unfortunately I am now stuck trying to install matplotlib.
I first of all tried the current distributed version but had no luck with that so I thought i would download the git repository and try that. I have got this far:
changed the make.osx file so that it will work in Python 3:
import urllib -> import urllib.request
urllib.urlretrieve() -> urllib.request.urlretrieve()
Even after that I still had a problem with it not finding the freetype2 headers. I googled around and discovered that I could solve this by editing a line in setupext.py:
'darwin' : [], -> 'darwin' : ['/usr/local'],
However, I still get an error message when using the make.osx file. Here is how I am calling the file from Terminal:
sudo make -f make.osx PREFIX=/usr/local PYVERSION=3.2 fetch deps mpl_build mpl_install
I realise that matplotlib isn't officially supported on Python 3 yet but I thought that maybe someone somewhere as at least managed to get it to compile/install?
Any help would be much appreciated,
Adam.
I have included the error I get below:
basedirlist is: ['/usr/local']
============================================================================
BUILDING MATPLOTLIB
matplotlib: 1.2.x
python: 3.2.2 (v3.2.2:137e45f15c0b, Sep 3 2011, 17:28:59)
[GCC 4.2.1 (Apple Inc. build 5666) (dot 3)]
platform: darwin
REQUIRED DEPENDENCIES
numpy: 1.6.2rc1
freetype2: found, but unknown version (no pkg-config)
OPTIONAL BACKEND DEPENDENCIES
libpng: found, but unknown version (no pkg-config)
Tkinter: Tkinter: version not identified, Tk: 8.5, Tcl: 8.5
Gtk+: no
* Building for Gtk+ requires pygtk; you must be able
* to "import gtk" in your build/install environment
Mac OS X native: yes
Qt: no
Qt4: Qt: 4.7.4, PyQt4: 4.8.6
PySide: no
Cairo: no
OPTIONAL DATE/TIMEZONE DEPENDENCIES
datetime: present, version unknown
dateutil: matplotlib will provide
pytz: matplotlib will provide
adding pytz
OPTIONAL USETEX DEPENDENCIES
dvipng: no
ghostscript: /bin/sh: gs: command not found
latex: no
[Edit setup.cfg to suppress the above messages]
============================================================================
pymods ['pylab']
packages ['matplotlib', 'matplotlib.backends', 'matplotlib.backends.qt4_editor', 'matplotlib.projections', 'matplotlib.testing', 'matplotlib.testing.jpl_units', 'matplotlib.tests', 'mpl_toolkits', 'mpl_toolkits.mplot3d', 'mpl_toolkits.axes_grid', 'mpl_toolkits.axes_grid1', 'mpl_toolkits.axisartist', 'matplotlib.sphinxext', 'matplotlib.tri', 'matplotlib.delaunay', 'pytz', 'dateutil', 'dateutil.zoneinfo']
running build
running build_py
copying lib/matplotlib/mpl-data/matplotlibrc -> build/lib.macosx-10.6-intel-3.2/matplotlib/mpl-data
copying lib/matplotlib/mpl-data/matplotlib.conf -> build/lib.macosx-10.6-intel-3.2/matplotlib/mpl-data
running build_ext
building 'matplotlib.ft2font' extension
gcc-4.2 -DNDEBUG -g -O3 -arch i386 -arch x86_64 -I/usr/local/include -I/usr/local/include/freetype2 -isysroot /Developer/SDKs/MacOSX10.6.sdk -DPY_ARRAY_UNIQUE_SYMBOL=MPL_ARRAY_API -DPYCXX_ISO_CPP_LIB=1 -DPYCXX_PYTHON_2TO3=1 -I/usr/local/include -I/Library/Frameworks/Python.framework/Versions/3.2/lib/python3.2/site-packages/numpy/core/include -I/usr/local/include -I. -I/usr/local/include/freetype2 -I/Library/Frameworks/Python.framework/Versions/3.2/lib/python3.2/site-packages/numpy/core/include/freetype2 -I/usr/local/include/freetype2 -I./freetype2 -I/Library/Frameworks/Python.framework/Versions/3.2/include/python3.2m -c src/ft2font.cpp -o build/temp.macosx-10.6-intel-3.2/src/ft2font.o
In file included from /Library/Frameworks/Python.framework/Versions/3.2/include/python3.2m/bytearrayobject.h:9,
from /Library/Frameworks/Python.framework/Versions/3.2/include/python3.2m/Python.h:73,
from ./CXX/WrapPython.h:58,
from ./CXX/Extensions.hxx:37,
from src/ft2font.h:6,
from src/ft2font.cpp:3:
/Developer/SDKs/MacOSX10.6.sdk/usr/include/stdarg.h:4:25: error: stdarg.h: No such file or directory
In file included from /Developer/SDKs/MacOSX10.6.sdk/usr/include/c++/4.2.1/iosfwd:45,
from /Developer/SDKs/MacOSX10.6.sdk/usr/include/c++/4.2.1/bits/stl_algobase.h:70,
from /Developer/SDKs/MacOSX10.6.sdk/usr/include/c++/4.2.1/bits/char_traits.h:46,
from /Developer/SDKs/MacOSX10.6.sdk/usr/include/c++/4.2.1/string:47,
from ./CXX/Python3/Exception.hxx:47,
from ./CXX/Python3/Objects.hxx:45,
from ./CXX/Python3/Extensions.hxx:52,
from ./CXX/Extensions.hxx:42,
from src/ft2font.h:6,
from src/ft2font.cpp:3:
/Developer/SDKs/MacOSX10.6.sdk/usr/include/c++/4.2.1/i686-apple-darwin11/bits/c++locale.h: In function ‘int std::__convert_from_v(int* const&, char*, int, const char*, ...)’:
/Developer/SDKs/MacOSX10.6.sdk/usr/include/c++/4.2.1/i686-apple-darwin11/bits/c++locale.h:77: error: ‘va_start’ was not declared in this scope
/Developer/SDKs/MacOSX10.6.sdk/usr/include/c++/4.2.1/i686-apple-darwin11/bits/c++locale.h:85: error: ‘va_end’ was not declared in this scope
In file included from /Library/Frameworks/Python.framework/Versions/3.2/include/python3.2m/bytearrayobject.h:9,
from /Library/Frameworks/Python.framework/Versions/3.2/include/python3.2m/Python.h:73,
from ./CXX/WrapPython.h:58,
from ./CXX/Extensions.hxx:37,
from src/ft2font.h:6,
from src/ft2font.cpp:3:
/Developer/SDKs/MacOSX10.6.sdk/usr/include/stdarg.h:4:25: error: stdarg.h: No such file or directory
In file included from /Developer/SDKs/MacOSX10.6.sdk/usr/include/c++/4.2.1/iosfwd:45,
from /Developer/SDKs/MacOSX10.6.sdk/usr/include/c++/4.2.1/bits/stl_algobase.h:70,
from /Developer/SDKs/MacOSX10.6.sdk/usr/include/c++/4.2.1/bits/char_traits.h:46,
from /Developer/SDKs/MacOSX10.6.sdk/usr/include/c++/4.2.1/string:47,
from ./CXX/Python3/Exception.hxx:47,
from ./CXX/Python3/Objects.hxx:45,
from ./CXX/Python3/Extensions.hxx:52,
from ./CXX/Extensions.hxx:42,
from src/ft2font.h:6,
from src/ft2font.cpp:3:
/Developer/SDKs/MacOSX10.6.sdk/usr/include/c++/4.2.1/i686-apple-darwin11/x86_64/bits/c++locale.h: In function ‘int std::__convert_from_v(int* const&, char*, int, const char*, ...)’:
/Developer/SDKs/MacOSX10.6.sdk/usr/include/c++/4.2.1/i686-apple-darwin11/x86_64/bits/c++locale.h:77: error: ‘va_start’ was not declared in this scope
/Developer/SDKs/MacOSX10.6.sdk/usr/include/c++/4.2.1/i686-apple-darwin11/x86_64/bits/c++locale.h:85: error: ‘va_end’ was not declared in this scope
lipo: can't figure out the architecture type of: /var/tmp//ccafJH1l.out
error: command 'gcc-4.2' failed with exit status 1
make: *** [mpl_build] Error 1
Okay...I think have managed to get matplotlib to install now...
First of all you need to install numpy. I have instructions to do this on another post: install numpy
Now open Terminal and clone the git repository for matplotlib (assumes you have git installed):
git clone git://github.com/matplotlib/matplotlib.git (this might take a while)
Once the clone is complete open your user folder in Finder
In your user folder open the matplotlib directory
There is a file called `make.osx' open this with TextEdit (or similar)
Change the following lines:
MACOSX_DEPLOYMENT_TARGET=10.6
OSX_SDK_VER=10.6
To:
MACOSX_DEPLOYMENT_TARGET=10.7
OSX_SDK_VER=10.7
Change the following lines:
${PYTHON} -c 'import urllib; urllib.urlretrieve("${ZLIBURL}", "${ZLIBFILE}")' &&\
${PYTHON} -c 'import urllib; urllib.urlretrieve("${PNGURL}", "${PNGFILE}")' &&\
${PYTHON} -c 'import urllib; urllib.urlretrieve("${FREETYPEURL}", "${FREETYPEFILE}")'
To:
${PYTHON} -c 'import urllib.request; urllib.request.urlretrieve("${ZLIBURL}", "${ZLIBFILE}")' &&\
${PYTHON} -c 'import urllib.request; urllib.request.urlretrieve("${PNGURL}", "${PNGFILE}")' &&\
${PYTHON} -c 'import urllib.request; urllib.request.urlretrieve("${FREETYPEURL}", "${FREETYPEFILE}")'
Save the changes
Open the file called setupext.py in idle
Find the line 'darwin' : [], and change it to 'darwin' : ['/usr/local'],
Save the file
Open Terminal again and type the following:
sudo make -f make.osx PREFIX=/usr/local PYVERSION=3.2 fetch deps mpl_build mpl_install
After some time matplotlib should be installed in the following directory:
/usr/local/lib/Python3.2/site-packages/
Open the above directory and also the following directory:
/Library/Python/3.2/site-packages/
Copy/move the following directories from /usr/local/lib/Python3.2/site-packages/ to /Library/Python/3.2/site-packages/:
dateutil
matplotlib
mpl_toolkits
matplotlib should be now installed
If you open idle and type import matplotlib it shouldn't return an error
I tried out the matplotlib/examples/user_interfaces/embedding_in_qt4_wtoolbar.py file and it seems works fine
Hope someone else finds this useful!
Thanks again for the assistance,
Adam.