I have a table of about 60GB and I'm trying to create an index,
and its very slow (almost a day, and still running!)
I see most of the time is on Disk I/O(4MB/s), and it doesn't use the memory or cpu so much
I tried: running 'pragma cache_zise = 10000' and 'pragma page_zise=4000'
(after I created the table), and its still doesn't help.
How can I make the 'create index' run in reasonable time?
Creating an index on a database table is a one time operation and it can be expensive based on many factors ranging from how many fields and of what type are included in the index, the size of the data table that is to be indexed, the hardware of the machine the database is running on, and possibly even more.
To give a reasonable answer on speeding things up, we would need to know the schema of the table, the definition of the index you are creating, are you reasonably sure if you are including uniqueness in your index that the data is actually unique, what are the hardware specs of your server, what are your disk speeds, how much available space on the disks, are you using a raid array, what level of raid, how much ram do you have and what is the utilization. etc...
Now all that said, this might be faster but I have not tested it.
make a structurally duplicate table of the table you wish to index.
Add the index to the new empty table.
copy the data from the old table to the new table in chunks.
drop the old table.
My theory is that it will be less expensive to index the data as it is added than to dig through the data that is already there and add the index after the fact.
When you create table,you should create the index. PS:you should consider the index is properly.and you need not to create the index at runtime.
Related
indexes make read fast but write slower. But why can't you have single writes and have db add indexes asynchronously with time, also cache in the INSERT until it's indexed?
Is there any database like that?
Converting my comments to an answer:
indexes make read fast but write slower
That's an oversimplification and it's also misleading.
Indexes make data lookups faster because the DBMS doesn't need to do a table-scan to find rows matching a predicate (the WHERE part of a query). Indexes don't make "reads" any faster (that's entirely dependent on the characteristics of your disk IO) and when used improperly they can sometimes even make queries slower (for reasons I won't get into).
I want to stress that the additional cost of writing to a single index, or even multiple indexes, when executing a DML statement (INSERT/UPDATE/DELETE/MERGE/etc) is negligible, really! (In actuality: foreign-key constraints are a much bigger culprit - and I note you can practically eliminate the cost of foreign-key constraint checking by adding additional indexes!). Indexes are primarily implemented using B-trees (a B-tree is essentially like a binary-tree, except rather than each node having only 2 children it can have many children because each tree-node comes with unused space for all those child node pointers, so inserting into the middle of a B-tree won't require data to be moved-around on-disk unlike with other kinds of trees, like a heap-tree).
Consider this QA where a Postgres user (like yourself) reports inserting 10,000 rows into a table. Without an index it took 78ms, with an index it took 84ms, that's only a 7.5% increase, which at that scale (6ms!) is so small it may as well be a rounding error or caused by IO scheduling. That should be proof enough it shouldn't be something you should worry about without actual hard data showing it's a problem for you and your application.
I assume you have this negative impression about indexes after reading an article like this one, which certainly gives the impression that "indexes are bad" - but while the points mentioned in that article are not wrong, there's a LOT of problems with that article so you shouldn't take it dogmatically. (I'll list my concerns with that article in the footer).
But why can't you have single writes and have db add indexes asynchronously with time
By this I assume you mean you'd like a DMBS to do a single-row INSERT by simply appending a new record to the end of a table and then immediately returning and then at an arbitrary point later the DBMS' housekeeping system would update the indexes afterwards.
The problem with that is that it breaks the A, C, and I parts of the the A.C.I.D. model.
Indexes are used for more than just avoiding table-scans: they're also used to store copies of table data for the benefit of queries that would use the index and which also need (for example) a small subset of the table's data, this significantly reduces disk reads. For this reason, RDBMS (and ISO SQL) allow indexes to include non-indexed data using the INCLUDES clause.
Consider this scenario:
CREATE INDEX IX_Owners ON cars ( ownerId ) INCLUDE ( colour );
CREATE INDEX IX_Names ON people ( name ) INCLUDE ( personId, hairColour );
GO;
SELECT
people.name,
people.hairColour,
cars.colour
FROM
cars
INNER JOIN people ON people.personId = cars.ownerId
WHERE
people.name LIKE 'Steve%'
The above query will not need to read either the cars or people tables on-disk. The DBMS will be able to fully answer the query using data only in the index - which is great because indexes tend to exist in a small number of pages on-disk which tend to be in proximal-locality which is good for performance because it means it will use sequential IO which scales much better than random IO.
The RDBMS will perform a string-prefix index-scan of the people.IX_Names index to get all of the personId (and hairColour) values, then it will look-up those personId values in the cars.IX_Owners index and be able to get the car.colour from the copy of the data inside the IX_Owners index without needing to read the tables directly.
Now, assuming that another database client has just completed inserted a load of records into the cars and/or people table with a COMMIT TRANSACTION just for good measure, and the RDMBS uses your idea of only updating indexes later whenever it feels like it, then if that same database client re-runs the query from above it would return stale data (i.e. wrong data) because the query uses the index, but the index is old.
In addition to using index tree nodes to store copies of table data to avoid non-proximal disk IO, many RDBMS also use index-trees to store entire copies - even multiple copies of table data, to enable other scenarios, such as columnar data storage and indexed-VIEWs - both of these features absolutely require that indexes are updated atomically with table data.
Is there any database like that?
Yes, they exist - but they're not widely used (or they're niche) because for the vast majority of applications it's entirely undesirable behaviour for the reasons described above.
There are distributed databases that are designed around eventual consistency, but clients (and entire application code) needs to be designed with that in-mind, and it's a huge PITA to have to redesign a data-centric application to support eventual-consistency which is why you only really see them being used in truly massive systems (like Facebook, Google, etc) where availability (uptime) is more important than users seeing stale-data for a few minutes.
Footnote:
Regarding this article: https://use-the-index-luke.com/sql/dml/insert
The number of indexes on a table is the most dominant factor for insert performance. The more indexes a table has, the slower the execution becomes. The insert statement is the only operation that cannot directly benefit from indexing because it has no where clause.
I disagree. I'd argue that foreign-key constraints (and triggers) are far more likely to have a larger detrimental effect on DML operations.
Adding a new row to a table involves several steps. First, the database must find a place to store the row. For a regular heap table—which has no particular row order—the database can take any table block that has enough free space. This is a very simple and quick process, mostly executed in main memory. All the database has to do afterwards is to add the new entry to the respective data block.
I agree with this.
If there are indexes on the table, the database must make sure the new entry is also found via these indexes. For this reason it has to add the new entry to each and every index on that table. The number of indexes is therefore a multiplier for the cost of an insert statement.
This is true, but I don't know if I agree that it's a "multiplier" of the cost of an insert.
For example, consider a table with hundreds of nvarchar(1000) columns and several int columns - and there's separate indexes for each int column (with no INCLUDE columns). If you're inserting 100x megabyte-sized rows all-at-once (using an INSERT INTO ... SELECT FROM statement) the cost of updating those int indexes is very likely to require much less IO than the table data.
Moreover, adding an entry to an index is much more expensive than inserting one into a heap structure because the database has to keep the index order and tree balance. That means the new entry cannot be written to any block—it belongs to a specific leaf node. Although the database uses the index tree itself to find the correct leaf node, it still has to read a few index blocks for the tree traversal.
I strongly disagree with this, especially the first sentence: "adding an entry to an index is much more expensive than inserting one into a heap structure".
Indexes in RDBMS today are invariably based on B-trees, not binary-trees or heap-trees. B-trees are essentially like binary-trees except each node has built-in space for dozens of child node pointers and B-trees are only rebalanced when a node fills its internal child pointer list, so a B-tree node insert will be considerably cheaper than the article is saying because each node will have plenty of empty space for a new insertion without needing to re-balance itself or any other relatively expensive operation (besides, DBMS can and do index maintenance separately and independently of any DML statement).
The article is correct about how the DBMS will need to traverse the B-tree to find the node to insert into, but index nodes are efficently arranged on-disk, such as keeping related nodes in the same disk page which minimizes index IO reads (assuming they aren't already loaded into memory first). If an index tree is too big to store in-memory the RDBMS can always keep a "meta-indexes" in-memory so it could potentially instantly find the correct B-tree index without needing to traverse the B-tree from the root.
Once the correct leaf node has been identified, the database confirms that there is enough free space left in this node. If not, the database splits the leaf node and distributes the entries between the old and a new node. This process also affects the reference in the corresponding branch node as that must be duplicated as well. Needless to say, the branch node can run out of space as well so it might have to be split too. In the worst case, the database has to split all nodes up to the root node. This is the only case in which the tree gains an additional layer and grows in depth.
In practice this isn't a problem, because the RDBMS's index maintenance will ensure there's sufficient free space in each index node.
The index maintenance is, after all, the most expensive part of the insert operation. That is also visible in Figure 8.1, “Insert Performance by Number of Indexes”: the execution time is hardly visible if the table does not have any indexes. Nevertheless, adding a single index is enough to increase the execute time by a factor of a hundred. Each additional index slows the execution down further.
I feel the article is being dishonest by suggesting (implying? stating?) that index-maintenance happens with every DML. This is not true. This may have been the case with some early dBase-era databases, but this is certainly not the case with modern RDBMS like Postgres, MS SQL Server, Oracle and others.
Considering insert statements only, it would be best to avoid indexes entirely—this yields by far the best insert performance.
Again, this claim in the article is not wrong, but it's basically saying if you want a clean and tidy house you should get rid of all of your possessions. Indexes are a fact of life.
However tables without indexes are rather unrealistic in real world applications. You usually want to retrieve the stored data again so that you need indexes to improve query speed. Even write-only log tables often have a primary key and a respective index.
Indeed.
Nevertheless, the performance without indexes is so good that it can make sense to temporarily drop all indexes while loading large amounts of data—provided the indexes are not needed by any other SQL statements in the meantime. This can unleash a dramatic speed-up which is visible in the chart and is, in fact, a common practice in data warehouses.
Again, with modern RDBMS this isn't necessary. If you do a batch insert then a RDBMS won't update indexes until after the table-data has finished being modified, as a batch index update is cheaper than many individual updates. Similarly I expect that multiple DML statements and queries inside an explicit BEGIN TRANSACTION may cause an index-update deferral provided no subsequent query in the transaction relies on an updated index.
But my biggest issue with that article is that the author is making these bold claims about detrimental IO performance without providing any citations or even benchmarks they've run themselves. It's even more galling that they posted a bar-chart with arbitrary numbers on, again, without any citation or raw benchmark data and instructions for how to reproduce their results. Always demand citations and evidence from anything you read making claims: because the only claims anyone should accept without evidence are logical axioms - and a quantitative claim about database index IO cost is not a logical axiom :)
For PostgreSQL GIN indexes, there is the fastupdate feature. This stores new index entries into a unordered unconsolidated area waiting for some other process to file them away into the main index structure. But this doesn't directly match up with what you want. It is mostly designed so that the index updates are done in bulk (which can be more IO efficient), rather than in the background. Once the unconsolidated area gets large enough, then a foreground process might take on the task of filing them away, and it can be hard to tune the settings in a way to get this to always be done by a background process instead of a foreground process. And it only applies to GIN indexes. (With the use of the btree_gin extension, you can create GIN indexes on regular scalar columns rather than the array-like columns it usually works with.) While waiting for the entries to be consolidated, every query will have to sequential scan the unconsolidated buffer area, so delaying the updates for the sake of INSERT can come at a high cost for SELECTs.
There are more general techniques to do something like this, such as fractal tree indexes. But these are not implemented in PostgreSQL, and wherever they are implemented they seem to be proprietary.
I've got a process that inserts about 1 million records a day into a table and it's been doing that for a year. I then have a secondary table that joins to the results table and selects a count of the results grouped by an id and status for the part three months. Everything has been going on fine but the query now is performing extremely slow , I can't seem to figure out what's gone wrong. Could someone point me towards where I'd need to start with to get the performance up.
We can think of a table as of a large file on disk. To search some information in the file you need to scan it. This is expensive.
To make the process more efficient, RDBMS builds indexes - data structures, that are usually kept in memory, organised to simplify specific queries and for each row contain references where to find the row within the file. The more rows you have, the larger become indexes.
At some point the indexes become too large to fit into memory and parts of it are swapped into disk. Random access to popular indexes start causing a lot of disk IO operations, because the OS is constantly saving/loading parts of the indexes, and this is much slower than working with just memory.
What to do heavily depends on the data, there are several approaches, but the common idea behind them is to make popular indexes fit into memory again:
you can just add some memory
you can use smaller datatypes
you can delete or merge indexes and rewrite queries to use the indexes in a certain way
you can partition your data and distribute an index among several machines
...
And make sure you do use indexes, because if a table is rapidly growing, table scans of the whole table will slow down your queries very soon.
I read those sentences from the book Use The Index
Nevertheless, the performance without indexes is so good that it can make sense to temporarily drop all indexes while loading large amounts of data—provided the indexes are not needed by any other SQL statements in the meantime. This can unleash a dramatic speed-up which is visible in the chart and is, in fact, a common practimce in data warehouses.
I could understand that creating index after data insert to an empty table is more efficient way. However, Although inserting data to an indexed table is slower,I think re-creating the index is also very expensive.
So my question is, is it also quicker when large amout of rows already exists in the table before inserting? If yes, How much ratio of new rows it is suitable? How to define the 'Large'?
It depends. Only way to be sure is to try it out with your (test) data and in your (test) enviroment.
As others have said, "it depends". But it's worth explaining why such a seemingly simple question is so complicated.
Other than the percent of data added, there are many factors that must be considered:
What kind of indexes? Bitmap, reverse key, compressed, domain?
How many indexes, how many columns do they have, what is the size of the columns, what is the block size?
How ordered is the inserted data?
Can indexes be rebuilt in parallel?
How much data can fit in the buffer cache (memory)?
What is the statistics gathering strategy, can stats run with cascade => false?
Explain plan can potentially answer half this question. It can be used to predict the time to build an index. But the time estimates are notoriously bad, and Oracle does not even attempt to estimate the cost of INSERT STATEMENT.
And there are likely other issues I haven't thought of.
I'm working with table partitioning on extremely large fact table in a warehouse. I have executed the script a few different ways. With and without non clustered indexes. With indexes it appears to dramatically expand the log file while without the non clustered indexes it appears to not expand the log file as much but takes more time to run due to the rebuilding of the indexes.
What I am looking for is any links or information as to what is happening behind the scene specifically to the log file when you split a table partition.
I think it isn't to hard to theorize what is going on (to a certain extent). Behind the scenes each partition is given a different HoBT, which in normal language means each partition is in effect sitting on it's own hidden table.
So theorizing the splitting of a partition (assuming data is moving) would involve:
inserting the data into the new table
removing data from the old table
The NC index can be figured out, but depending on whether there is a clustered index or not, the theorizing will alter. It also matters whether the index is partition aligned or not.
Given a bit more information on the table (CL or Heap) we could theorize this further
If the partition function is used by a
partitioned table and SPLIT results in
partitions where both will contain
data, SQL Server will move the data to
the new partition. This data movement
will cause transaction log growth due
to inserts and deletes.
This is from an article by Microsoft on Partitioned Table and Index Strategies
So looks like its doing a delete from old partition and and insert into the new partition. This could explain the growth in t-log.
So, it seems to me like a query on a table with 10k records and a query on a table with 10mil records are almost equally fast if they are both fetching roughly the same number of records and making good use of simple indexes(auto increment, record id type indexed field).
My question is, will this extend to a table with close to 4 billion records if it is indexed properly and the database is set up in such a way that queries always use those indexes effectively?
Also, I know that inserting new records in to a very large indexed table can be very slow because all the indexes have to be recalculated, if I add new records only to the end of the table can I avoid that slow down, or will that not work because the index is a binary tree and a large chunk of the tree will still have to be recalculated?
Finally, I looked around a bit for a FAQs/caveats about working with very large tables, but couldn't really find one, so if anyone knows of something like that, that link would be appreciated.
Here is some good reading about large tables and the effects of indexing on them, including cost/benefit, as you requested:
http://www.dba-oracle.com/t_indexing_power.htm
Indexing very large tables (as with anything database related) depends on many factors, incuding your access patterns, ratio of Reads to Writes and size of available RAM.
If you can fit your 'hot' (i.e. frequently accessed index pages) into memory then accesses will generally be fast.
The strategy used to index very large tables, is using partitioned tables and partitioned indexes. BUT if your query does not join or filter on the partition key then there will no improvement in performance over an unpartitioned table i.e. no partition elimination.
SQL Server Database Partitioning Myths and Truths
Oracle Partitioned Tables and Indexes
It's very important to keep your indexes as narrow as possible.
Kimberly Tripp's The Clustered Index Debate Continues...(SQL Server)
Accessing the data via a unique index lookup will slow down as the table gets very large, but not by much. The index is stored as a B-tree structure in Postgres (not binary tree which only has two children per node), so a 10k row table might have 2 levels whereas a 10B row table might have 4 levels (depending on the width of the rows). So as the table gets ridiculously large it might go to 5 levels or higher, but this only means one extra page read so is probably not noticeable.
When you insert new rows, you cant control where they are inserted in the physical layout of the table so I assume you mean "end of the table" in terms of using the maximum value being indexed. I know Oracle has some optimisations around leaf block splitting in this case, but I dont know about Postgres.
If it is indexed properly, insert performance may be impacted more than select performance. Indexes in PostgreSQL have vast numbers of options which can allow you to index part of a table or the output of an immutable function on tuples in the table. Also size of the index, assuming it is usable, will affect speed much more slowly than will the actual scan of the table. The biggest difference is between searching a tree and scanning a list. Of course you still have disk I/O and memory overhead that goes into index usage, and so large indexes don't perform as well as they theoretically could.