MySQL design question - which is better, long tables or multiple databases? - sql

So I have an interesting problem that's been the fruit of lots of good discussion in my group at work.
We have some scientific software producing SQLlite files, and this software is basically a black box. We don't control its table designs, formats, etc. It's entirely conceivable that this black box's output could change, and our design needs to be able to handle that.
The SQLlite files are entire databases which our user would like to query across. There are two ways (we see) of implementing this, one, to create a single database and a backend in Python that appends tables from each database to the master database, and two, querying across separate databases' tables and unifying the results in Python.
Both methods run into trouble when the black box produces alters its table structures, say for example renaming a column, splitting up a table, etc. We have to take this into account, and we've discussed translation tables that translate queries of columns from one table format to another.
We're interested in ease of implementation, how well the design handles a change in database/table layout, and speed. Also, a last dimension is how well it would work with existing Python web frameworks (Django doesn't support cross-database queries, and neither does SQLAlchemy, so we know we are in for a lot of programming.)

If you find yourself querying across databases, you should look into consolidating. Cross-database queries are evil.
If your queries are essentially relegated to individual databases, then you may want to stick with multiple databases, as clearly their separation is necessary.

You cannot accommodate arbitrary changes in a database's schema without categorizing and anticipating that change in some way. In the very best case with nontrivial changes, you can sometimes simply ignore new data or tables, in the worst case, your interpretation of the data will entirely break down.
I've encountered similar issues where users need data pivoted out of a normalized schema. The schema does NOT change. However, their required output format requires a fixed number of hierarchical levels. Thus, although the database design accommodates all the changes they want to make, their chosen view of that data cannot be maintained in the face of their changes. Thus it is impossible to maintain the output schema in the face of data change (not even schema change). This is not to say that it's not a valid output or input schema, but that there are limits beyond which their chosen schema cannot be used. At this point, they have to revise the output contract, the pivoting program (which CAN anticipate this and generate new columns) can then have a place to put the data in the output schema.
My point being: the semantics and interpretation of new columns and new tables (or removal of columns and tables which existing logic may depend on) is nontrivial unless new columns or tables can be anticipated in some way. However, in these cases, there are usually good database designs which eliminate those strategies in the first place:
For instance, a particular database schema can contain any number of tables, all with the same structure (although there is no theoretical reason they could not be consolidated into a single table). A particular kind of table could have a set of columns all similarly named (although this "array" violates normalization principles and could be normalized into a commonkey/code/value schema).
Even in a data warehouse ETL situation, a new column is going to have to be determined whether it is a fact or a dimensional attribute, and then if it is a dimensional attribute, which dimension table it is best assigned to. This could somewhat be automated for facts (obvious candidates would be scalars like decimal/numeric) by inspecting the metadata for unmapped columns, altering the DW table (yikes) and then loading appropriately. But for dimensions, I would be very leery of automating somethings like this.
So, in summary, I would say that schema changes in a good normalized database design are the least likely to be able to be accommodated because: 1) the database design already anticipates and accommodates a good deal of change and flexibility and 2) schema changes to such a database design are unlikely to be able to be anticipated very easily. Conversely, schema changes in a poorly normalized database design are actually more easy to anticipate as shortcomings in the database design are more visible.
So, my question to you is: How well-designed is the database you are working from?

You say that you know that you are in for a lot of programming...
I'm not sure about that. I would go for a quick and dirty solution not a 'generic' solution because generic solutions like the entity attribute value model often have a bad performance. Don't do client side joining (unifying the results) inside your Python code because that is very slow. Use SQL for joining, it is designed for that purpose. Users can also make their own reports with all kind of reporting tools that generate sql statements. You don't have to do everything in your app, just start with solving 80% of the problems, not 100%.
If something breaks because something inside the black box changes you can define views for backward compatibility that keeps your app functioning.
Maybe the scientific software will add a lot of new features and maybe it will change its datamodel because of those new features..? That is possible but then you will have to change your application anyways to take profit from those new features.

It sounds to me as if your problem isn't really about MySQL or SQLlite. It's about the sharing of data, and the contract that needs to exist between the supplier of data and the user of the same data.
To the extent that databases exist so that data can be shared, that contract is fundamental to everything about databases. When databases were first being built, and database theory was first being solidified, in the 1960s and 1970s, the sharing of data was the central purpose in building databases. Today, databases are frequently used where files would have served equally well. Your situation may be a case in point.
In your situation, you have a beggar's contract with your data suppliers. They can change the format of the data, and maybe even the semantics, and all you can do is suck it up and deal wth it. This situation is by no means uncommon.
I don't know the specifics of your situation, so what follows could be way off target.
If it was up to me, I would want to build a database that was as generic, as flexible, and as stable as possible, without losing the essential features of structured and managed data. Maybe, some design like star schema would make sense, but I might adopt a very different design if I were actually in your shoes.
This leaves the problem of extracting the data from the databases you are given, transforming the data into the stable format the central database supports, and loading it into the central database. You are right in guessing that this involves a lot of programming. This process, known as "ETL" in data warehousing texts, is not the simplest of programming challenges.
At least ETL collects all the hard problems in one place. Once you have the data loaded into a database that's built for your needs, and not for the needs of your suppliers, turning the data into valuable information should be relatively easy, at least at the programming or SQL level. There are even OLAP tools that make using the data as simple as a video game. There are challenges at that level, but they aren't the same kind of challenges I'm talking about here.
Read up on data warehousing, and especially data marts. The description may seem daunting to you at first, but it can be scaled down to meet your needs.

Related

Sql Database structure for housing historical data and display changes

Good morning,
This is more of a concept question then anything.
I am looking to design a database and interface that will track changes to the entries (in this case people) and display those changes readily.
(user experience would look something like this)
for user A
Date Category Activity
8/8/14 change position position 1 -> position 2
8/9/14 change department department a -> department b
...
...
the visual experience seem like it would benefit from an E-A-V design, however i am designing the database to be easy to data mine and from my reading, i think that E-A-V is not the right way to go.
does it make sense to duplicate data just to display it?
if not, does anyone have a suggestion of how to query the history table and display? (currently using jquery and php to leverage the db...i suppose i could do something interesting from a coding perspective to get it done)
thank you for your help,
Travis
Creating an efficient operational database environment and a creating an 'easy-to-data mine' environment are two separate (and often opposing) goals.
Others might disagree with me but in my opinion it is best to create your database based on operational readiness (This means using your E-A-V design as mentioned above) and then worry about data transformation later. This may make it inconvenient later to transform the data to allow for easy mining but it will accomplish an incredibly important goal which is to eliminate the possibility for data error.
Once you have a good system in place where you can collect data appropriately, then you can create a warehouse or datamart environment to more conveniently extract that data.
This may sound like a lot of work but from a data integrity perspective, it is much safer than trying to create some system that is designed entirely for reporting. That's my personal opinion at least.
(sorry cannot comment yet)
You have to analyse the data you need to persist.
if you have only a couple of tables, with no relationship, you probably don't need the database.
In this case the database solution probably will be slower(connection/transmission/security overhead ...).
well if it's a few MBs of data, I would keep everything in one table.
You can easily load the whole data set in memory and do what you need to do.

Should I use EAV database design model or a lot of tables

I started a new application and now I am looking at two paths and don't know which is good way to continue.
I am building something like eCommerce site. I have a categories and subcategories.
The problem is that there are different type of products on site and each has different properties. And site must be filterable by those product properties.
This is my initial database design:
Products{ProductId, Name, ProductCategoryId}
ProductCategories{ProductCategoryId, Name, ParentId}
CategoryProperties{CategoryPropertyId, ProductCategoryId, Name}
ProductPropertyValues{ProductId, CategoryPropertyId, Value}
Now after some analysis I see that this design is actually EAV model and I read that people usually don't recommend this design.
It seems that dynamic sql queries are required for everything.
That's one way and I am looking at it right now.
Another way that I see is probably named a LOT WORK WAY but if it's better I want to go there.
To make table
Product{ProductId, CategoryId, Name, ManufacturerId}
and to make table inheritance in database wich means to make tables like
Cpus{ProductId ....}
HardDisks{ProductId ....}
MotherBoards{ProductId ....}
erc. for each product (1 to 1 relation).
I understand that this will be a very large database and very large application domain but is it better, easier and performance better than the option one with EAV design.
EAV is rarely a win. In your case I can see the appeal of EAV given that different categories will have different attributes and this will be hard to manage otherwise. However, suppose someone wants to search for "all hard drives with more than 3 platters, using a SATA interface, spinning at 10k rpm?" Your query in EAV will be painful. If you ever want to support a query like that, EAV is out.
There are other approaches however. You could consider an XML field with extended data or, if you are on PostgreSQL 9.2, a JSON field (XML is easier to search though). This would give you a significantly larger range of possible searches without the headaches of EAV. The tradeoff would be that schema enforcement would be harder.
This questions seems to discuss the issue in greater detail.
Apart from performance, extensibility and complexity discussed there, also take into account:
SQL databases such as SQL Server have full-text search features; so if you have a single field describing the product - full text search will index it and will be able to provide advanced semantic searches
take a look at no-sql systems that are all the rage right now; scalability should be quite good with them and they provide support for non-structured data such as the one you have. Hadoop and Casandra are good starting points.
You could very well work with the EAV model.
We do something similar with a Logistics application. It is built on .net though.
Apart from the tables, your application code has to handle the objects correctly.
See if you can add generic table for each object. It works for us.

Normalisation and multi-valued fields

I'm having a problem with my students using multi-valued fields in access and getting confused about normalisation as a result.
Here is what I can make out. Given a 1-to-many relationship, e.g.
Articles Comments
-------- --------
artID{PK} commID{PK}
text text
artID{FK}
Access makes it possible to store this information into what appears to be one table, something like
Articles
--------
artID{PK}
text
comment
+ value
"value" referring to multiple comment values for the comment "column", which access actually stores as a separate table. The specifics of how the values are stored - table, its PK and FK - is completely hidden, but it is possible to query the multi-valued field, e.g. in the example above with the query
INSERT INTO article( [comment].Value )
VALUES ('thank you')
WHERE artID = 1;
But the query doesn't quite reveal the underlying structure of the hidden table implementing the multi-valued field.
Given this (disaster, in my view) - my problem is how to help newcomers to database design and normalisation understand what Access is offering them, why it may not be helpful, and that it is not a reason to ignore the basics of the relational model. More specifically:
Are there better ways, besides queries as above, to reveal the structure behind multi-valued fields?
Are there good examples of where the multi-valued field is not good enough, and shows the advantage of normalising explicitly?
Are there straightforward ways to obtain the multi-select visual output of Access multi-values, but based on separate, explicit tables?
Thanks!
I cannot give you advice in using this feature, because I never used it; however, I can give you reasons not to use it.
I want to have full control on what I'm doing. This is not the case for multi-valued fields, therefore I don't use them.
This feature is not expandable. What if you want to add a date field to your comments, for instance?
It is sometimes necessary to upsize an Access (backend) database to a "big" database (SQL Server, Oracle). These Databases don't offer such a feature. It is often the customer who decides which database has to be used. Recently I had to migrate an Access application (frontend) using an Oracle backend to a SQL-Server backend because my client decided to drop his Oracle server. Therefore it is a good idea to restrict yourself to use only common features.
For common tasks like editing lookup tables I created generic forms. My existing solutions will not work with multi-valued fields.
I have a (self-made) tool that synchronizes changes in the structure of the database on my developer’s site with the database on the client’s site. This tool cannot deal with multi-valued fields.
I have tools for the security management that can grant SELECT, INSERT, UPDATE and DELETE rights on tables or revoke them. Again, the management tool does not work with multi-valued fields.
Having a separate table for the comments allows you to quickly inspect all the comments (by opening the table). You cannot do this with multi-valued fields.
You will not see the 1 to n relation between the articles and the comments in a database diagram.
With a separate table you can choose whether you want to cascade deletes to the details table or not. If you don't, you will not be able to delete an article as long as there are comments attached to it. This can be desirable, if you want to protect the comments from being deleted inadvertently.
It is important to realize the difference between physical and logical relationships. Today the whole internet and web services (SOAP) quite much realizes on a data format that is multi-value in nature.
When you represent multi-value data with a relational database (such as Access), then behind the scenes you are using a traditional (and legitimate) relation. I cannot stress that as such, then the use of multi-value columns in Access is in fact a LEGITIMATE relational model.
The fact that table is not exposed does not negate this issue. In fact, if you represent an invoice (master record, and repeating details) as a XML data cube, then we see two things:
1) you can build and represent that invoice with a relational database like Access
2) such a relational data model that is normalized can ALSO be represented as a SINGLE xml string.
3) deleting the XML record (or string) means that cascade delete of the child rows (invoice details) MUST occur.
So while it is true that Multi-Value fields been added to Access to deal with SharePoint, it is MOST important to realize that such data can be mapped to a relational database (if you could not do this, then Access could not consume that XML data using relational database tables as ACCESS CURRENTLY DOES RIGHT NOW).
And with the web such as XML, and SharePoint then the need to consume and manage and utilize such data is not only widespread, but is in fact a basic staple of the internet.
As more and more data becomes of a complex nature, we find the requirement for multi-value data exploding in use. Anyone who used that so called "fad" the internet is thus relying and using data that is in fact VERY OFTEN XML and is multi-value (complex) in nature.
As long as the logical (not physical) relational data model is kept, then use of multi-value columns to represent such data is possible and this is exactly what Access is doing (it is mapping the relational data model to a complex model). Note that the complex (xml) data model does NOT necessary have to be relational in nature. However, if you ARE going to map such data to Access then the complex multi-value model MUST CONFORM TO A RELATIONAL data model.
This is EXACTLY what is occurring in Access.
The fact that such a correct and legitimate math relational model is not exposed is of little issue here. Are we to suggest that because Excel does not expose the binary codes used then users will never learn about computers? Or perhaps we all must program in assembler so we all correctly learn how computers works.
At the end of the day, who cares and why does this matter? The fact that people drive automatic cars today does not toss out the concept that they are using different gears to operate that car. The idea that we shut down all of society because someone is going to drive an automatic car or in this case use complex data would be galactic stupid on our part.
So keep in mind that extensions to SQL do exist in Access to query the multi-value data, but as well pointed out here those underlying tables are not exposed. However, as noted, exposing such tables would STILL REQUIRE one to not change or mess with cascade delete since that feature is required TO MAINTAIN A INTERSECTION OF FEATURES and a CORRECT MATH relational model between the complex data model (xml) and that of using two related tables to represent such data.
In other words, you can use related tables to represent the complex data model IF YOU REMOVE the ability of users to play with the referential integrity options. The RI options MUST remain as set in those hidden tables else such data will not be able to make the trip BACK to the XML or complex data model of which it was consumed from.
As noted, in regards to users being taught how gasoline reacts with oxygen for that of learning to drive a car, or using a word processor and being forced to learn a relational model and expose the underlying tables makes little sense here.
However, the points made here in regards to such tables being exposed are legitimate concerns.
The REAL problem is SQL server and Oracle etc. cannot consume or represent that complex data WHILE ACCESS CAN CONSUME such data.
As noted, the complex data ship has LONG ago sailed! XML, soap, and the basic technologies of the internet are based on this complex data model.
In effect, SQL server, Oracle and most databases cannot that consume this multi-value data represent it without users having to create and model such data in a relational fashion is a BIG shortcoming of SQL server etc.
Access stands alone in this ability to consume this data.
So, for anyone who used a smartphone, iPad or the web, you are using basic technologies that are built around using complex data, something that Access now allows.
It is likely that the rest of the industry will have to follow suit given that more and more data is complex in nature. If the database industry does not change, then the mainstream traditional relational database system will NOT be the resting place of such data.
A trend away from storing data in related tables is occurring at a rapid pace right now and products like SharePoint, or even Google docs is proof of this concept. So Access is only reacting to market pressures and it is likely that other database vendors will have to follow suit or simply give up on being part of the "fad" called the internet.
XML and complex data structures are STAPLE and fact of our industry right now – this is not an issue we all should run away from, but in fact embrace.
Albert D. Kallal (Access MVP)
Edmonton, Alberta Canada
kallal#msn.com
The technical discussion is interesting. I think the real problem lies in student understanding. Because it is available in Access students will use it, and initially it will probably provide a simple solution to some design problems. The negatives will occur later when they try and use the data. Maybe a simple example demonstrating the problems would persuade some students to avoid using multi-valued fields ? Maybe an example of storing the data in another, more usable format would help ?
Good luck !
Peter Bullard
MS Access does a great job of simplifying database management and abstracting out a lot of complexity. This however makes the learning of dbms concepts a bit difficult. Have you tried using other 'standard' dbms tools like MySQL (or even sqlite). From a learning perspective they may be better.
I know this post is old. But, it's not quite the same as every other post I've seen on this topic. This one has someone making a good case for using Multi Valued Fields...
As someone who is trying who is still trying very hard to get their head around Access, I find the discussion for and against using the Multi Valued Fields incredibly frustrating.
I'm trying to sort through it all, but if everyone is so against them, what is an alternative method? It seems that in every search result I find everyone is either telling you how to use Multi Valued Fields and Controls or telling you how horrible and what a mistake they are. Many people refer to an alternative to them, but nobody says "Here's an example". I'm here to learn about these things. And while I know that this is a simpler concept for a lot of people in these forums, I could really use some examples to take a look at.
I'm at a point where I have to decide which way to go. It would be wonderful to compare examples of using Multi Valued Fields and alternatives and using a control to select multiple values.
Or am I wrong and the functionality of a combobox where you can select multiple items is only available through Access?
I want to address the last of your questions first. There is a way of providing a visual presentation of a parent child relationship. It's called subforms. If you get help about subforms in Access, it will explain the concept.
I have used subforms in a project where I wanted to display the transaction header in a form and the transaction details in a subform. There is nothing to hinder this construct even when the data is stored in two normalized tables.
Of course, this affects the screen, not the database. That's the whole point. Normalization is relevant to storage and retrieval, not to other uses of data.

Database model refactoring for combining multiple tables of heterogeneous data in SQL Server?

I took over the task of re-developing a database of scientific data which is used by a web interface, where the original author had taken a 'table-per-dataset' approach which didn't scale well and is now fairly difficult to manage with more than 200 tables that have been created. I've spent quite a bit of time trying to figure out how to wrangle the thing, but the datasets contain heterogeneous values, so it is not reasonably possible to combine them into one table with a set schema for column definitions.
I've explored the possibility of EAV, XML columns, and ended up attempting to go with a table with many sparse columns since the database is running on SQL Server 2008. The DBAs are having some issues with my recently created sparse columns causing some havoc with their backup scripts, so I'm left wondering again if there isn't a better way to do this. I know that EAV does not lead to decent performance, and my experiments with XML data types also demonstrated poor performance, probably thanks to the large number of records in some of the tables.
Here's the summary:
Around 200 tables, most of which have a few columns containing floats and small strings
Some tables have as many as 15,000 records
Table schemas are not consistent, as the columns depended on the number of samples in the original experimental data.
SQL Server 2008
I'll be treating most of this data as legacy in the new version I'm developing, but I still need to be able to display it and query it- and I'd rather not have to do so by dynamically specifying the table name in my stored procedures as it would be with the current multi-table approach. Any suggestions?
I would suggest that the first step is looking to rationalise the data through views; attempt to consolidate similar data sets into logical pools through views.
You could then look at refactoring the code to look at the views, and see if the web platform operates effectively. From there you could decided whether or not the view structure is beneficial and if so, look to physically rationalising the data into a new table.
The benefit of using views in this manner is you should be able to squeak a little performance out of indexes on the views, and it should also give you a better handle on the data (that said, since you are dev'ing the new version, it would suggest you are perfectly capable of understanding the problem domain).
With 200 tables as simple raw data sets, and considering you believe your version will be taking over, I would probably go through the prototype exercise of seeing if you can't write the views to be identically named to what your final table names will be in V2, that way you can also backtest if your new database structure is in fact going to work.
Finally, a word to the wise, when someone has built a database in the way you've described, without looking at the data, and really knowing the problem set; they did it for a reason. Either it was bad design, or there was a cause for what now appears on the surface to be bad design; you raise consistency as an issue - look to wrap the data and see how consistent you can make it.
Good luck!

SQL and Flat Files... In harmony?

I was just thinking, how quick it would be to store the actual data of an application in a flat file.
Now, you can't just go storing everything in a flat file... sometimes sorts and searches are required, and to go through directories and files recursively could be a pain.
Now, imagine, you stored all your search-able data in a database, and had a pointer field, that pointed to a data file?
This would be very specific per app, however- so long as all my search-able data is stored in the database, why should I store the actual data in a database?
(Locking, Data integrity aside) it would be faster, I am sure... but how much, and is it worth doing it?
Well you often want to do things in queries beyond search on the data. For instance you might might not search on a field called cost_center, but you might have a case statment that processes things differently depending on the information in the field. Or you might need to concatenate information together. You might update one field based onthe information in another field. You might not search on a field today and need to search on it tomorrow.
A properly designed relational database can easily perform well with terrabytes of data.
And frankly you should never even consider "data integrity aside". If you don't have data integrity you don't have data.
As to whether what you want is a good idea, it depends on the type of data you are storing and the types of things you intend to do with it. There isn't enough information to say for sure.
Well "Locking, Data integrity aside" should mean a faster system. If you drop constraints you should improve performance.
But in practical terms, I don't think it's going to be faster. There's lot of development time behind RDBMSs and that's why they are quick. Sure, non-relational databases are performing better than them in highly parallel situations and scenarios which take advantage of their qualities, for instance. However, your idea does not offer an improvement such as exploiting parallelism... any performance advantage would come from dropping the qualities of RDBMSs...
As well as other answers...
Sharing of data: how are multiple clients going to access data on a share?
Backup/Restore: synching of text and "searchable"
Security/permissions on text data
Change anomalies
There is no need to implement a SQL database just to perform searches. Lots of applications store their data in XML, and you can search in many ways, e.g., using Lucene. How fast it is entirely depends on the quantity of data and how you structure it - just like a database.
It can perform very fast, but can complicate things when you want to run more than one app server.
BTrieve was essential what you describe. Back in the DOS days it was a very fast database.